Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01290 ATGGGGGTGCCTGCAACTTTGGGCGATGATTTTCTGAGAGAAAGAGCGGCGAAGATGAGAGAATCACTGCAAAAGAGCCAAACTATTACTGATAACGTCGTCTCCATTCTCGGCTCCTTTGATCACCGTCTTTCAGCTCTCGAGACCGCCATGCGCCCTACTCAGATCAGAACCAATTCTATTCGTAAAGCTCACGAGAACATTGACAAGACTTTGAAGTCTGCGGAGGTTATTTTAGCACAATTTGATCTCTCTCGTCAGGCAGAGACGAAAATACTTAGAGGGCCACACGAGGATTTGGAAAGTTATCTCGGGGCAATTGGTCTATTAAGAAACAATATCAAATTCTTTAGCGGCCATAAAGGTTTTAAGGGCAACGAGGTAGTGCTTAACCAGGCAAATAATCTGCTTGCAAAGGCCATCTCAAAGCTGGAAGATGAATTCAGACAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCTGAACGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGAATCTCCTGGTCATGATTCAGGTGGAAAGAATCCCTCCTCAAATCATCATTCTGCACATCATGATAATAACTTGGAGAATGCTGTCTACACACCTCCCACTCTCATACCACCGCGTGTTCTGCCACTGCTGCACGATTTATCACTGCAAATGGTTCAAGCCGGTCATCAACAACAAATTTTAAAAGTCTACAGGGATACCCGTTCGGTCGTTATGGAAGAAAGCCTACGGAAATTGGGAGTTGAAAAACTTAGCAAAGAAGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTCAAACTGTTGTTTGCTGGAGAACGAAAAGTTTGTGATCAAATATTTGAAGGCCTTGAATCGCTTAAAGACCAATCATTTGCTGAGGTTACTGGTAGTAGTGTGTCTGTGCTATTTAGTTTCGGGGAGGCGATTGCAAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTCTTGGACATGTATGAAATAATGCGAGAGCTTCACTCCGAGATTGAGACAATTTTCAAGGGTAAAGCGTGCAGTGAGATCAAGGAATCTGCATCGGGTTTGACCAAACGGCTTGCACAGACAGCTAAGGATACATTTAGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTAGATGGAACTGTTCATCCTTTAACAAGCTATGTGATTAATTATGTGAAATTTCTATTTGACTATCAAGCAACCTTGAAGCAGCTTTTCCAAGAATTTGAAGAGAGTGGTCAAACGAGTTCAGAACTGGCCACTGTCACAATGCAAATTATGCAGGCTCTTCAATCTAATTTGGACGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCACCTATTCCTCATGAACAATATTCACTATATAGTTAGATCTGTTCGCAGATCCGAAGCCAAGGATTTGCTCGGGGACGATTGGGTTCAGAGACATAGGAGGGTCGTACAGCAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTTTGCAATGCCTCTCTGTTCAAGGGTTAACTTCATCCGGCGGTGGCAGCGTACCTGGTATAGATGGAGGAAATAGTAGCGGAGTTTCTAGGGCGCTTATTAAAGACAGGTTCAAGACGTTCAATATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGACACTGAGCTGCGGGAGTCCCTACGACTTTCGGTTGCTGAAGTCTTACTTCCTGCATACCGATCCTTCCTAAAACGTTTTGGGCCACTAGTTGATGTTGGAAAAAATCCCCAAAAGTATGTCAGGTACCAGCCAGAAGATCTCGAAAGAATGCTCGGAGAATTTTTCGAAGGGAAGAACTTGAGCGAACCTAAGCGGTAG 1956 43.46 MGVPATLGDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKSAEVILAQFDLSRQAETKILRGPHEDLESYLGAIGLLRNNIKFFSGHKGFKGNEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSESPGHDSGGKNPSSNHHSAHHDNNLENAVYTPPTLIPPRVLPLLHDLSLQMVQAGHQQQILKVYRDTRSVVMEESLRKLGVEKLSKEDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGLESLKDQSFAEVTGSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACSEIKESASGLTKRLAQTAKDTFSDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEESGQTSSELATVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLVDVGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKR 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7761805 7768502 - Cp4.1LG01g14140.1 Cpe01g01290 462603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01290 651 MobiDBLite consensus disorder prediction 169 205 - -
Cpe01g01290 651 MobiDBLite consensus disorder prediction 171 190 - -
Cpe01g01290 651 Coils Coil 130 150 - -
Cpe01g01290 651 Gene3D Exocyst complex component Exo70 184 651 - -
Cpe01g01290 651 Gene3D Exocyst complex component Exo70 76 181 - -
Cpe01g01290 651 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 647 - -
Cpe01g01290 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 647 IPR004140 GO:0000145|GO:0006887
Cpe01g01290 651 SUPERFAMILY Cullin repeat-like 78 642 IPR016159 -
Cpe01g01290 651 Pfam Exo70 exocyst complex subunit 279 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01290 Cpe09g00367 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01290 Cpe-Chr1:7761805 Cpe10g00315 Cpe-Chr10:1826990 0 dispersed
Cpe07g00257 Cpe-Chr7:1665689 Cpe01g01290 Cpe-Chr1:7761805 1.39E-66 dispersed
Cpe12g00541 Cpe-Chr12:5545982 Cpe01g01290 Cpe-Chr1:7761805 1.60E-55 dispersed
Cpe01g01290 Cpe-Chr1:7761805 Cpe09g00367 Cpe-Chr9:2204089 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01290 K07195 - csv:101206262 1206.05