Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe01g01301 | TTAAATACTTTAATTATAATTACTTTTGATTATCCACTCTTCTTCTTTTTTCCCGTCCTCTATATAAACACTCTCCTTCTTCGCTTACTGAGTCACTTCCGAGTTTACATTATGAACTCAATTCCCTTCATTTTCCTTCTCTTCCTCTCTCTCGGCCTTGCCGGAGCTTCCGATTCTCCTCCGCCGTCCGCCTTCCTCTGTAAATCCACTCTCTATCCTAAGCTTTGCCGCTCCATTCTCTCCTCCATCCGATTCTCCCCCTCCGATCCATACGGCTACGGAAAATTCTCCGTCAAGAAGTGTATCAAACAGGCGATCAAAATGTCGAGCGTTATCGGCGAGTATCTCAACCGAGGAGGCGATTCGAGGCTGAATCGGCAGGAGTTTGGCGCTCTGGAAGACTGCAGAGAGCTTTCCGATTCGAATGTGGAGTTTCTCCAGTCGATTGATGGCGTATTGGAGGCAGCGGAGGGCGTCGATGAGGAACTGGTGGAGCGTATTGAGAGTATTTTGAGCGCGATCGTGACGAACGGCCAGACTTGTATCGACGGATTGGTGGAGTCGAGGAGTAGTTTGGGGAATGCGCTAACGGCACCGCTGTTGAGCGCGGGGAAGCTGTACAGTGTATCGTTAGGACTGGTTAAGAACTCGCTGTCGCGGCGGTGGAAGAAGCGGAAGCAGAAGGGAGACGGCGAGGGAGGGAATTTCCCGGCGGCTGCGCAGAGCAGAGAGCCATTGAACACGCTGATCAAGGGACTACATACGATGGGTTCGTGCAACCAATCCACGAAGTGTTCGGGAAGGAAGCGCTTGTTGACTGATTTGGGCACCACAGGAATTTTGATCAACAACACTGTGCTTTTCATCAATTATCTA | 876 | 50.34 | LNTLIIITFDYPLFFFFPVLYINTLLLRLLSHFRVYIMNSIPFIFLLFLSLGLAGASDSPPPSAFLCKSTLYPKLCRSILSSIRFSPSDPYGYGKFSVKKCIKQAIKMSSVIGEYLNRGGDSRLNRQEFGALEDCRELSDSNVEFLQSIDGVLEAAEGVDEELVERIESILSAIVTNGQTCIDGLVESRSSLGNALTAPLLSAGKLYSVSLGLVKNSLSRRWKKRKQKGDGEGGNFPAAAQSREPLNTLIKGLHTMGSCNQSTKCSGRKRLLTDLGTTGILINNTVLFINYL | 292 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 7823500 | 7826870 | - | Cp4.1LG01g14190.1 | Cpe01g01301 | 462614 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe01g01301 | 292 | PANTHER | PECTINESTERASE/PECTINESTERASE INHIBITOR 47-RELATED | 42 | 287 | - | - | |
| Cpe01g01301 | 292 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 65 | 217 | IPR035513 | - | |
| Cpe01g01301 | 292 | PANTHER | PECTINESTERASE | 42 | 287 | - | - | |
| Cpe01g01301 | 292 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 66 | 216 | IPR035513 | - | |
| Cpe01g01301 | 292 | CDD | PMEI-like_3 | 66 | 216 | - | - | |
| Cpe01g01301 | 292 | Pfam | Plant invertase/pectin methylesterase inhibitor | 66 | 211 | IPR006501 | GO:0004857 | |
| Cpe01g01301 | 292 | SMART | PMEI_2 | 57 | 213 | IPR006501 | GO:0004857 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe01g01301 | Cpe09g00348 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g01301 | Cpe-Chr1:7823500 | Cpe02g00345 | Cpe-Chr2:1861733 | 2.14E-18 | dispersed | |
| Cpe01g01301 | Cpe-Chr1:7823500 | Cpe09g00348 | Cpe-Chr9:2104944 | 1.09E-131 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe01g01301 | K01051 | - | csv:101206112 | 380.948 |