Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01302 ATGAGAATAATCTCTCCGCCTGTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTGCGTCGGCTCTGATTCCGGCATTCATAACAACAATCTCGCCGCTCCTCACCGGCCGCAATCTGAGAAAACCACAGCCAAACGACGGAGGAGGAATCAAGATGAAACGAAATGCCAGATTCATAATCATAACGCTAATGGATCCAACAACGCCTCTCCCGCTCGGCGGAGCTCCATTTACAGAGGAGTTACTAGGCACCGATGGACCGGCCGGTTCGAAGCTCATCTCTGGGACAAAAGTTCATGGAATAACATTCAGAACAAAAAGGGAAGGCAAGGAGCCTACGACAACGAGGAAGCTGCGGCTCGAACTTATGACCTTGCTGCCCTCAAATACTGGGGCCCTGGGACCACTCTCAATTTCCCGGTAGAGTCGTACACGAATGAAATGGAAGAAATGCGGAAAGTTTCCAAGGAGGAATATTTGGCGTCGTTACGGCGGCAGAGCAGTGGTTTTTCCAGAGGCGTTTCCAAGTACCGCGGCGTTGCCCGGCACCACCACAACGGCCGGTGGGAGGCTCGGATTGGCCGTGTTTTTGGAAGCAAATATCTTTACTTGGGAACTTACAATACACAAGAAGAAGCAGCTGCAGCATATGACATGGCTGCCATTGAGTACAGAGGAGCCAATGCAGTCACCAACTTCGACATTAGCAATTACATTGGGAGGTTACAGAATAAATCATCACCAGATGACCCCAATTGCTCCCCTGCTTCTTCTCAGGGCGAAGTAGTACAACAACAACACGACGTGCATCAGCAGCAGCAGCAACAACAACAACAAATTGCATTCTCGGGCCCGCCCGACCTCCAGTTTTCGATTGAGAATAACCCCACTATGGTTGTTATGGATGAACCACCAACACAAGACGATCATGATCTCCATTGGTCTTTCTTAGACACGGGATTATTCGTGCATGTCCCTGACCTCCCACTTGAGAAATCGAGTGAGTTAGCTGACTTATACTTCGACGAGATCAGGTTTGAAGATGATATTGGGTTGATGTTCGAAGCAAGCTTAGAGAACAATAAGAACTGTGAAGGTAATAACAACAACGATGATGATAATGTTGGGAAGAAGGAGGTCAACAACTGTAATGAGAAAATCAGATTGTTCGCAGCTACTACGACAACTTCACCGTCTTCTTCGTCGATAACCACCTCGGTTTCGTGTGAATTTAGGGTTTGA 1272 47.72 MRIISPPVSSSSSSSSSSSSSSSSSSSSCVGSDSGIHNNNLAAPHRPQSEKTTAKRRRRNQDETKCQIHNHNANGSNNASPARRSSIYRGVTRHRWTGRFEAHLWDKSSWNNIQNKKGRQGAYDNEEAAARTYDLAALKYWGPGTTLNFPVESYTNEMEEMRKVSKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGSKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIGRLQNKSSPDDPNCSPASSQGEVVQQQHDVHQQQQQQQQQIAFSGPPDLQFSIENNPTMVVMDEPPTQDDHDLHWSFLDTGLFVHVPDLPLEKSSELADLYFDEIRFEDDIGLMFEASLENNKNCEGNNNNDDDNVGKKEVNNCNEKIRLFAATTTTSPSSSSITTSVSCEFRV 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7828280 7831409 - Cp4.1LG01g14110.1 Cpe01g01302 462615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01302 423 Gene3D AP2/ERF domain 185 246 IPR036955 GO:0003700|GO:0006355
Cpe01g01302 423 Gene3D AP2/ERF domain 87 152 IPR036955 GO:0003700|GO:0006355
Cpe01g01302 423 MobiDBLite consensus disorder prediction 252 297 - -
Cpe01g01302 423 ProSiteProfiles AP2/ERF domain profile. 186 244 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 MobiDBLite consensus disorder prediction 1 84 - -
Cpe01g01302 423 MobiDBLite consensus disorder prediction 1 47 - -
Cpe01g01302 423 Pfam AP2 domain 185 236 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 Pfam AP2 domain 87 142 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 SUPERFAMILY DNA-binding domain 86 152 IPR016177 GO:0003677
Cpe01g01302 423 SUPERFAMILY DNA-binding domain 185 246 IPR016177 GO:0003677
Cpe01g01302 423 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 404 - -
Cpe01g01302 423 ProSiteProfiles AP2/ERF domain profile. 87 150 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 CDD AP2 185 246 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Cpe01g01302 423 SMART rav1_2 87 156 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 SMART rav1_2 186 250 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 12 404 - -
Cpe01g01302 423 PRINTS Ethylene responsive element binding protein signature 226 246 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 CDD AP2 86 151 IPR001471 GO:0003700|GO:0006355
Cpe01g01302 423 MobiDBLite consensus disorder prediction 67 84 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01302 Cpe09g00347 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01302 Cpe-Chr1:7828280 Cpe18g00584 Cpe-Chr18:6264092 1.13E-91 dispersed
Cpe03g00474 Cpe-Chr3:2753857 Cpe01g01302 Cpe-Chr1:7828280 4.98E-56 dispersed
Cpe08g00691 Cpe-Chr8:5282239 Cpe01g01302 Cpe-Chr1:7828280 1.88E-54 dispersed
Cpe12g00785 Cpe-Chr12:7092240 Cpe01g01302 Cpe-Chr1:7828280 3.57E-65 dispersed
Cpe01g01302 Cpe-Chr1:7828280 Cpe09g00347 Cpe-Chr9:2099690 3.64E-161 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48843 PF00847 AP2 1.80E-09 CL0081 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01302 - - csv:101206349 602.053