Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01329 ATGGCTGAGTTCCCTTCAATTCCCCTGTTTTTTCTCCTCTGCAACATCTGTCTTTCCATGGCGTCTTTGAACAACGACCGCATTGCTCTTCTGTCTTTCAAACAGTCCATTACCGAAGACCCAGACAGCTCTCTCAGCAACTGGAATTCTTCTGATGAAACCCCATGTGGTTGGAATGGTGTTACATGCAAGGATCTAAGAGTTGTTTCTCTCAGCATTCCCAACAAGAAACTCAACGGTGTTCTTCCTTCTTCTCTGGGGTTTCTCTCCGAGCTTCGTCATGTGAATCTGAGGAGTAATAACCTCCATGGAGCCTTGCCATTACAGCTTTTCCAAGCTAATGGAATCCAAAGCTTGGTGCTTTATGGTAATTCCTTATCTGGGTCTGTGCCAAATGAGATTGGTAACCTCAAAAACCTTCAAATCTTGGATTTATCTCACAATTCCTTTAATGGGTCGTTGCCTGTTTCCTTAATGCAATGCAGAAGATTGAGAATTCTTGATCTTACTCATAACAATCTTACCAATTCTCTGCCTAATGGGTTTGGTTCCAGTTTGAATTTCTTGGAAAACTTGGATCTTTCTTACAATAACTTCAATGGTTCAATTCCAGTGGATATTGGTAACCTGTCTAGCTTGCAAGGCACTGTTGATTTCTCTCATAATCTCTTCTCCGGCTCTATCCCACCCACCCTGGGAAACCTTCCTGAAAAGGTTTATATTGATCTTACTTATAATAATCTGAGTGGTTCAATCCCCCAAAATGGTGCTCTTATGAACAGAGGACCAACAGCTTTCATTGGGAATCCTGGCCTTTGTGGACCGCCATTGAAGAATCCATGTTCTTCTGAAGCTCCGGCTGCAAGTTTATCTTCACCAGACAATGGTAATAAGTATGGGAAAGGAGGGGTGAGTAAGAGCAGTTTGGTTGCAATAATCATAGGTGATATCATTGGTATTTGCCTGATTGGTGTTATGTTATCTTATTGCTATTTGAGGTTTTGGATTCATAGAAATGGGAAGAAGGCAGACCAATCTAAGTATGGTTTAGAGAAGGATGAGAAAGGAAGAAAGCATTGTCTGTGCTTTCAAAAGGGTGAATCCGAGAACGTTTCGGAGCATATCGAGCAGTTTGATTTGGTACCTCTGGATTCACGAGTCACGTTTGATCTCGACGAACTTCTCAAGGCATCGGCTTTCGTTTTGGGAAAAAGCGGTATCGGTATAGTGTATAAAGTTGTTCTTGAAGATGGACTCACTTTAGCTGTGAGAAGATTGGGTGAAGGAGGTTCTCAAAGATTCAAAGAGTTTCAAACTGAAGTTGAAGCAATTGGGAAGTTGAGGCATCCAAATCTTGTTAGTCTCAGAGCATATTATTGGTCTGTTGATGAAAAACTGCTTATTTATGATTACATACCAAATGGGAACCTTGCATCTGCCATTCATGGGAAGCCCGGGACGACACTGTTTACACCGCTACCGTGGTCTGCTCGGTTAAGGATCATGGAAGGCATTGCGAAAGGGTTGGTTTACTTGCACGAGTTCAGCCCCAAAAAGTATGTTCATGGTAATTTGAGAACCAACAACATACTTCTTGGACAGGAAATGATACCACATATTTCGAATTTCGGGCTTGCCCGCCTTGTTAACATTGCTGGAGGTACTCCGACCGTGCAATCGAGTCATATGGCAGAAGAAAAACAACTAAAGTTTGCCACTTCTGAAGCTAGTACATTCAGTTCTAGTATGATTACTTACTACCAAGCTCCCGAATCGTTCAAAGTCGTGAAGCCATCGCAGAAATGGGACGTGTACTCGTATGGTGTGATATTACTCGAAATGATCACAGGAAGGTTGCCTATAGTTCAGGTGGGAGCCTCGGAAATGGATCTTGTTCAATGGATTCAACTCTGTATTGAGGAAAAGAAGCCACTTTCGGACGTGATAGACCCGTGTTTGACTCCAGACGACGATGCGGACGAGGAGATCATCGAGGTTTTGAAGATGGCATTAGGTTGTGTTCAAAATAGTCCAGAAAGAAGACCGGCAATGAGACATGTTTGTGATGGTTTGAGCAGGTTGGGTGTCACTCCAAACTGA 2100 42.81 MAEFPSIPLFFLLCNICLSMASLNNDRIALLSFKQSITEDPDSSLSNWNSSDETPCGWNGVTCKDLRVVSLSIPNKKLNGVLPSSLGFLSELRHVNLRSNNLHGALPLQLFQANGIQSLVLYGNSLSGSVPNEIGNLKNLQILDLSHNSFNGSLPVSLMQCRRLRILDLTHNNLTNSLPNGFGSSLNFLENLDLSYNNFNGSIPVDIGNLSSLQGTVDFSHNLFSGSIPPTLGNLPEKVYIDLTYNNLSGSIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSEAPAASLSSPDNGNKYGKGGVSKSSLVAIIIGDIIGICLIGVMLSYCYLRFWIHRNGKKADQSKYGLEKDEKGRKHCLCFQKGESENVSEHIEQFDLVPLDSRVTFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNLVSLRAYYWSVDEKLLIYDYIPNGNLASAIHGKPGTTLFTPLPWSARLRIMEGIAKGLVYLHEFSPKKYVHGNLRTNNILLGQEMIPHISNFGLARLVNIAGGTPTVQSSHMAEEKQLKFATSEASTFSSSMITYYQAPESFKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGASEMDLVQWIQLCIEEKKPLSDVIDPCLTPDDDADEEIIEVLKMALGCVQNSPERRPAMRHVCDGLSRLGVTPN 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7998923 8001357 - Cp4.1LG01g13800.1 Cpe01g01329 462642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01329 699 Pfam Protein tyrosine and serine/threonine kinase 402 689 IPR001245 GO:0004672|GO:0006468
Cpe01g01329 699 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Cpe01g01329 699 SMART LRR_typ_2 89 113 IPR003591 -
Cpe01g01329 699 SMART LRR_typ_2 137 161 IPR003591 -
Cpe01g01329 699 SMART LRR_typ_2 186 210 IPR003591 -
Cpe01g01329 699 SMART LRR_typ_2 162 184 IPR003591 -
Cpe01g01329 699 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
Cpe01g01329 699 SUPERFAMILY Protein kinase-like (PK-like) 401 689 IPR011009 -
Cpe01g01329 699 SUPERFAMILY L domain-like 24 278 - -
Cpe01g01329 699 Gene3D Transferase(Phosphotransferase) domain 1 472 697 - -
Cpe01g01329 699 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Cpe01g01329 699 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Cpe01g01329 699 ProSiteProfiles Protein kinase domain profile. 396 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01329 699 CDD STKc_IRAK 402 694 - -
Cpe01g01329 699 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 9 695 - -
Cpe01g01329 699 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 695 - -
Cpe01g01329 699 Gene3D Phosphorylase Kinase; domain 1 365 471 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01329 Cpe09g00320 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01329 Cpe-Chr1:7998923 Cpe09g00581 Cpe-Chr9:4019405 0 dispersed
Cpe19g00068 Cpe-Chr19:506271 Cpe01g01329 Cpe-Chr1:7998923 8.37E-131 dispersed
Cpe01g01329 Cpe-Chr1:7998923 Cpe01g01802 Cpe-Chr1:14985673 0 wgd
Cpe01g01329 Cpe-Chr1:7998923 Cpe01g01802 Cpe-Chr1:14985673 0 wgd
Cpe01g01329 Cpe-Chr1:7998923 Cpe09g00320 Cpe-Chr9:1913703 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62146 PF07714 PK_Tyr_Ser-Thr 5.90E-27 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01329 - - csv:101215811 1196.42