Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01332 ATGGCTTCCAGAGAAGGGCAGCGGCGGCGTCAACATAATCACAATCTCGTGCCTCTTGCTGCTTTGATCAGTCAAGAGGCGAGGAGCGAGAGGTTGGAGAAACCGAGTTTAAGATATGGGAATGCAGCGCAGTCTAGAAAGGGGGAAGATTATTTTCTCATGAAAACTGATTGTCAGCGACTTCCTGGGAATCCTTCATCCACTTTCTCTGTATTTGCTATATTTGACGGACACAATGGAAATGCTGCAGCAATTTTCACGAGGGAACATTTGTTGAGTCATGTCTTGGGTGCACTTCCCCGTGGCCTCGGGCAGGAGGAGTGGCTTCAAGCTCTACCACGAGCGTTGGTTGCTGGATTTGTGAAGACAGACAAGGAGTTTCAGAGTAGAGGTGAAACATCTGGAACTACAGCTACGTTTGTGATCATCGATGGATGGACGGTGACAGTAGCGTCGGTTGGAGATTCCCGGTGTATTTTAGATACTCAGGGTGGTGCTGTCTCTGCTTTAACGATCGGCCCGCTCCGTTGTTGGCCGGGAGGCTTATGCCTTTCTCGATCCATTGGAGACATGGATGTCGGGGAGCTAATAATTGCTTCTGATGGCATCTGGGATGCCCTATCATCAGATATGGCTGCAAAGTCCTGCCGTGGACTACCAGCAGAGCTAGCTGCTAGGCAAGTTGTGAAGGAAGCCTTGAGAACAAGAGGCTTGAAGGATGATACAACGTGTATAGTTGTAGACATACTTCCTCCAGATAATTCATTACAGTCTTCCTCTCCCCAGAAGAAACAAAGCGTACTCAAATCTCTGTTATTCAGGAAAAAGTCTCACAGTTCTAACAAGCTATCCAAGAGCCTGCTGGGAACTGTAGAGTTGAGTGGATCTAAACACGGCACACCCGGACTGTTCTCTTGTGCTGTATGTCAAATAGATCTTGCTCCCAGTGAAGGCATCTCTGTTCATGCTGGTTCCATCTTCTCCACCAGCTCAAAGCCATGGCAAGGGCCTTTCCTTTGCGCCGATTGTCGAAACAAGAAGGATGCCATGGAAGGAAAGCGTCCCAGCGGGGTGAGAGTGGCATAG 1086 48.99 MASREGQRRRQHNHNLVPLAALISQEARSERLEKPSLRYGNAAQSRKGEDYFLMKTDCQRLPGNPSSTFSVFAIFDGHNGNAAAIFTREHLLSHVLGALPRGLGQEEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIIDGWTVTVASVGDSRCILDTQGGAVSALTIGPLRCWPGGLCLSRSIGDMDVGELIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDILPPDNSLQSSSPQKKQSVLKSLLFRKKSHSSNKLSKSLLGTVELSGSKHGTPGLFSCAVCQIDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVRVA 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8016062 8020148 + Cp4.1LG01g13890.1 Cpe01g01332 462645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01332 361 Pfam Protein phosphatase 2C 64 171 IPR001932 -
Cpe01g01332 361 Gene3D - 39 173 IPR036457 -
Cpe01g01332 361 PANTHER ALPHABET, ISOFORM E-RELATED 176 361 - -
Cpe01g01332 361 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 176 361 - -
Cpe01g01332 361 SMART PP2C_SIG_2 54 249 IPR001932 -
Cpe01g01332 361 SMART PP2C_4 28 247 IPR001932 -
Cpe01g01332 361 ProSiteProfiles PPM-type phosphatase domain profile. 31 249 IPR001932 -
Cpe01g01332 361 PANTHER ALPHABET, ISOFORM E-RELATED 7 172 - -
Cpe01g01332 361 Gene3D - 175 279 IPR036457 -
Cpe01g01332 361 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 7 172 - -
Cpe01g01332 361 CDD PP2Cc 47 249 IPR001932 -
Cpe01g01332 361 SUPERFAMILY PP2C-like 44 249 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01332 Cpe09g00317 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01332 Cpe-Chr1:8016062 Cpe04g00234 Cpe-Chr4:2873135 1.42E-161 dispersed
Cpe01g01332 Cpe-Chr1:8016062 Cpe09g00317 Cpe-Chr9:1882819 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01332 - - csv:101216777 620.157