Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01353 ATGGCTTCTGCTTCTGAAGCTCCTAAGGAAGTTCTTGAGGCTGACCAGGAATGGAAGAACGGGAAAGAACCAACACGGCAAGCCAAATGGTGGTATGCTACCTTCCATTCTGTCACGGCCATGATAGGTGCAGGGGTCCTCAGCCTGCCCTATGCCATGGTTTACTTAGGATGGGGTCCAGGGACAATGGTTTTGTCCATATCATGGTGCATGACACTAAACACAATGTGGCAGATGATTCAGCTCCATGAATGCATCCCAGGGACTCGTTTCGATCGATATATCGACCTCGGCCGACACGCTTTCGGTGAAAAACTTGGCCCCTGGATTGTGCTGCCGCAGCAACTCATTGTCCAAGTCGGCTGCGACATAGTGTATATGGTGACAGGCAAGTTCATGGAGATGGCTTGTGTGAACTGCGTTGAAGTGAAACAATCTTACTGGATTTTGATATTTGGTTCAATTCATCTCTTTCTTTCTCAACTTCCCAATTTCAATTCTGTTGCTGGTGTTTCTCTAGCAGCTGCCGTCATGTCTCTAAGCTATTCGACAATTGCATGGGTTGGGAGCCTGAGCCATGGTAGAATCCAAAACGTGAGCTATGCGTACAAGGAAACCAGCGTCCAAGATTCAATGTTTAGAGTCTTCAACGCCTTAGGCCAAATCTCCTTCGCATTCGCCGGCCACGCCGTGATTCTCGAGATTCAAGCCACCATACCATCAACGCCGGAGAAACCGTCAAAAGTTCCAATGTGGAAAGGCGCAGTGGGGGCTTATATCATCAACGCCATCTGCTACTTTCCGGTGGCTTTGATCGGATACTGGGCTTTTGGGCAAGATGTTGAAGATAATGTTCTTTTGAATCTCAAAAGACCTGCGTGGCTCATTGCGTCTGCTAATCTTATGGTTGTCGTTCATGTAATTGGCAGCTACCAGGTGTATGCCATGCCTGTGTTCGACTTGTTGGAGAGGATAATGAGGAAGAGATTCAACTTCCCTCATGGATTTCTCCTCAGATTTATCACTCGAACGGCTTATCTTCCAAGTGTTATGTGGCTAGTGATCAAGAAGCCAAAGCGCTACAGTGGCAGTTGGTTCATCAACTGGGCAAGCATATTGATTGGAGTGTTCATAATGTTGGCATCCACTGTGGGAGGCCTGCGCAATATAATAGCAGATGCTTCCACTTACACTTTCTATGCCTAA 1206 47.35 MASASEAPKEVLEADQEWKNGKEPTRQAKWWYATFHSVTAMIGAGVLSLPYAMVYLGWGPGTMVLSISWCMTLNTMWQMIQLHECIPGTRFDRYIDLGRHAFGEKLGPWIVLPQQLIVQVGCDIVYMVTGKFMEMACVNCVEVKQSYWILIFGSIHLFLSQLPNFNSVAGVSLAAAVMSLSYSTIAWVGSLSHGRIQNVSYAYKETSVQDSMFRVFNALGQISFAFAGHAVILEIQATIPSTPEKPSKVPMWKGAVGAYIINAICYFPVALIGYWAFGQDVEDNVLLNLKRPAWLIASANLMVVVHVIGSYQVYAMPVFDLLERIMRKRFNFPHGFLLRFITRTAYLPSVMWLVIKKPKRYSGSWFINWASILIGVFIMLASTVGGLRNIIADASTYTFYA 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8143332 8146430 + Cp4.1LG01g13780.1 Cpe01g01353 462666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01353 401 PANTHER OS05G0424000 PROTEIN-RELATED 346 396 - -
Cpe01g01353 401 Pfam Transmembrane amino acid transporter protein 27 381 IPR013057 -
Cpe01g01353 401 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 6 346 396 - -
Cpe01g01353 401 MobiDBLite consensus disorder prediction 1 20 - -
Cpe01g01353 401 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 6 13 347 - -
Cpe01g01353 401 PANTHER OS05G0424000 PROTEIN-RELATED 13 347 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01353 Cpe09g00623 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01353 Cpe-Chr1:8143332 Cpe03g00611 Cpe-Chr3:3664060 4.34E-175 dispersed
Cpe01g01353 Cpe-Chr1:8143332 Cpe09g00280 Cpe-Chr9:1664896 4.49E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01353 - - csv:101202821 724.931