Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01376 ATGCCGTCGCCTCAGATCCTACCTATAACCCAGCCCCCTTCGTCGTCTCCACTTACCTCAAGGGCCTCAGATGCCAATTCGATTATGGAAACTTCATCTACTGCATTAGATATAATGTTGCTTAAAGAAGGCGATGAACAGAGGTCTGGAGTTCTTGTTTCTCCGTTGTTTGAGGATGATAAGACGATAGCTTATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCTTCCAGCACATCCAGTTCTTCCTCCGGAAGCAATACTTACAAGCAGAAGCGGAGGCGAGTCAAGAGCGAAAACATTTTATCCTATCTTTCCGGTGACGGCCGCCACCAGACTATTGATCGTGATGTCGAGAATGCCGATGCTGATAGAGCTGAGAAATTTCTACTGACTCGCTTCGGTTTGAAACTCTCGAAATATATTCGGGTAGCATTCAGATGGATTGCAAGATTTCTCGCACTTGGTTGCTATTCATTGTTTCTTCTTCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCAAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATTACTGGAGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCCGAAAGAGGTATCATCGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACTATGAGTGATATGATTTATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAACATTAGAGAATTCGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGCGCTCATATAGCTGCCTGCACACTTTTGGAGCAAGCAATGAAGGAGGTTCGCAAAGTAGAAAGTATCTCATGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTATCAGGAGGGTATAATTTGCTCAGTCTAGTAGACTACTTTCACTCTCGAGGTTTATATCGTTCTCTTTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAATTATTAATCCTGGAAGAACCCAACATGGGAGCTGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGATTATTCTATACCATCAGATTCAAGTAAAACTTTTGCTGATACTCTTCAAAGCGTTGGAGTGAAAGCGGAAACATTTTTTTACGAAGGAAAGACACATACAGATGTATTTGTTCAGGATCCGTTGAGGGGAGGCAAAGATCAGATGTTTGAAGATCTTGTGGCGATCATCCATGCCGATGATGCAGAAGCCCTGGCCAAAGATGCGGTGGCACCTCCAAGAAGACGCCTTGTACCCGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCCTTCTAA 1440 42.78 MPSPQILPITQPPSSSPLTSRASDANSIMETSSTALDIMLLKEGDEQRSGVLVSPLFEDDKTIAYKPLLPRTSSYASSTSSSSSGSNTYKQKRRRVKSENILSYLSGDGRHQTIDRDVENADADRAEKFLLTRFGLKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERGIIVACIDYRNFPQGTMSDMIYDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEQAMKEVRKVESISWSVSQIKAYFGLSGGYNLLSLVDYFHSRGLYRSLFLSIMEGEQSLKRFSPELLILEEPNMGAAVSILPPIILFHGTADYSIPSDSSKTFADTLQSVGVKAETFFYEGKTHTDVFVQDPLRGGKDQMFEDLVAIIHADDAEALAKDAVAPPRRRLVPEFMLMLARSVSPF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8266632 8271844 - Cp4.1LG01g13340.1 Cpe01g01376 462689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01376 479 SUPERFAMILY alpha/beta-Hydrolases 181 443 IPR029058 -
Cpe01g01376 479 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 109 469 - -
Cpe01g01376 479 PANTHER ARYLACETAMIDE DEACETYLASE 109 469 - -
Cpe01g01376 479 MobiDBLite consensus disorder prediction 1 26 - -
Cpe01g01376 479 Pfam BD-FAE 193 403 - -
Cpe01g01376 479 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Cpe01g01376 479 MobiDBLite consensus disorder prediction 73 89 - -
Cpe01g01376 479 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Cpe01g01376 479 MobiDBLite consensus disorder prediction 12 26 - -
Cpe01g01376 479 MobiDBLite consensus disorder prediction 73 95 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01376 Cpe-Chr1:8266632 Cpe03g00692 Cpe-Chr3:4190273 5.93E-147 dispersed
Cpe01g01376 Cpe-Chr1:8266632 Cpe02g01423 Cpe-Chr2:12362496 3.58E-176 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01376 K15889 - csv:101206426 849.736