Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01379 ATGAGCAGCGGCAGAAGGAGAAAGCTTCATTTTAGCAAGATCTACTCGTTTGCTTGCGGGAAAGCTTCTTTAAAGGATGATCATTCACAACTTGGGGGACCTGGGTTCTCTCGTGTTGTTTTCTGTAATGAACCAAAGTGTTTTGAGGCAGAAATTCGTAGCTACATAGACAATTATGTTAGTACCACCAAGTATACTTTAGCTACTTTCCTGCCTAAGTCATTGTTTGAGCAATTCAGGAGAGTGGCCAATTTCTACTTTTTAGTCACTGGGATCCTTGCTTTTACTCCCCTTGCTCCTTACACCGCTGTCAGCGCCATCGTCCCTCTTATTCTCGTCATCTCGGCGACAATGATCAAAGAAGGGATCGAGGATTGGAGGCGCAAAAAACAGGATCTTGAGGTAAACAATAGAAAGGTAAAAGTGCACCATGGAGATGGAGTTTTTGGTTATACAGAGTGGAAGAATCTGATGGTTGGTGATATTGTGAAAGTAGAGAAGGATGGATTCTTTCCAGCTGATATTATCTTGCTTTCATCAAGTTACGAGGACGCAATCTGCTACGTTGAGACGACGAACCTGGACGGCGAGACGAATTTGAAACTAAAACAAGCGTTGGAGGTAACGTCGCATATGAACGAAGATTTTATCTTCAATAGCTTTAAGGCTATCCTAAAATGTGAGGATCCAAATGCAAATTTATACAGTTTTGTTGGTAGTTTAGAGCTGGAAGAACAACAATATCCTCTGTCTCCTCAACAGCTACTCCTTCGAGGCTCTAAGCTTCGGAATACTGATTATATATACGGGGTCGTTGTCTTTACGGGTCGTGACACGAAGGTTATTCAAAATTCTACTGATCCACCTTCAAAGCGAAGCAAAGTTGAGAGGAAAATGGACAAGATTATATATTTTTTGTTCTGTCTTCTGTTTTTGCTTGCTCTTGTAGGATCTATAGTTTTTGGCGTTGTGACTGAGGATGATTTGGAGAATGGGAGAATGAAACGATGGTATCTGAGGCCTGATGATGCTAGAGTTTTCTATGATCCAAAAAGGGCTCAAATGGCTGCAATTTTCCATTTTCTTACAGCACTGATGTTATATAACTACTTCATTCCAATATCACTCTATGTATCAATAGAAATTGTGAAAATTCTTCAGAGCATGTTCATCAATCAAGATATTAATATGTATTATGAAGAAGCGAATAAACCAGCTCGTGCTCGCACCTCGAATTTGAATGAAGAACTCGGTCAAGTTGATACGATACTCACTGACAAGACGGGAACTTTGACATGTAATTCAATGGAGTTCATTAAGTGTTCTGTGGCAGGGAGGGCTTATGGCCAGGTAAATGAGGGGAAGCACCATGAGGATGTCAAGAATCAAGCTTCACATATCAAAGGTTTTAACTTTAAGGATGATAGGATTATGAATGGGAATTGGGTTAATGAGCCTCATGCCAATGTCATCGAAACTTTTCTTCGTGTTCTTGCAACTTGTCATACGGCGATACCCGAAATCAATGAGGACAATGGAGAGGTTTCTTATGAGGCCGAATCTCCAGACGAAGCAGCATTCGTGATCGCTGCTAGAGAACTCGGATTCGAGTTCTACAAAAGAACACAGACAAGTATATCACTGCATGAGTTTGATCCTTCATTGGGCAAGAAAGTTGATAGGACATATAAACTGCTGCATGTTTTGGAGTTCAATAGCTCAAGAAAGCGGATGTCTGTCATAGTAAGAAATGAAGAGGCTAAGACATTGTTATTCTGTAAAGGTGCAGACAGTGTTATGTTTGAAAGGCTTGGAAAGAATGGGAGGGTGTTTGAGGAGGAGACCAAGGAACATGTCATTGAGTATGCTGATGCAGGATTGAGGACTTTGATACTTGCCTATCGCGAGCTCGACGACGAAGAATACAGAGAGTTTGATAGCAAGTTCACTATGGCGAAAAACTCGGTTAGTGTAGACCGAGAATCGTTGATTAATCAAGTGACCGATAAAATCGAAAGGAATCTGATTCTTCTTGGTGCCACTGCTGTTGAGGACAAGCTTCAAAATGGGGTTCCTGAGTGCATTGATAGGCTTGCTCAAGCAGGAATAAAGATTTGGGTATTGACTGGGGACAAAATGGAGACCGCTATCAATATTGGTTTTTCCTGTAGATTACTGAGACAAGATATGAAGCAGATTGTAATTACACTCGAGACGTCGGAAATTCAGGCATCGAGGCAAAGCGTCCTCGATCAAATTACTCGAGGGAGAGCTCAGATCGCTTCACCAAGTGGGATATCTGAAGCATTTGCATTAATCATTGATGGAAAATCACTTTCTTATGCTTTAGAGGACAGCATGAAGGCATTGTTTCTCGAGGTAGCAATACATTGTGCTTCTGTTATTTGCTGCCGTTCATCTCCAAAACAGAAGGCACTGGTAACGAGGTTAGTTAAATGTGGAACAGAGAAAACAACTTTAGCTATTGGCGACGGTGCCAACGACGTCGGAATGCTTCAAGAAGCAGACATTGGAGTTGGAATTAGCGGTGTTGAAGGAATGCAGGTGCTGAAGAACGCAGACGACCCATATGTTTTGATGATTCAAATTCTTCAAATATTAACGAGTTCTTTTATGTCTACCCAGGCCGTTATGTCGAGCGACGTTGTGATAGCACAATTCAAATATTTAGAGCACCTGCTTCTTGTTCATGGACATTGGTGCTATAGAAGGATATCATCAATGATTTGCTACTTTTTCTACAAGAACATTACTTTTGGTTTTACAATATTCTTATACGAAGCATTCACATCATTCTCTGGGCAGCCTGCATATAATGATTGGTTTCTATCGCTTTACAATGTGTTCTTCTCGTCGCTTCCAGTGGTAGCTTTGGGCGTTTTTGATCAGGATGTTTCTGCAAGACTCTGCCTCCAGTTTCCTCTCTTATACCAACAAGGAGTGCAGAATGTTCTATTCAGCTGGGTCCGAATTCTCAGTTGGATGTTTAATGGGCTGTGCAGTGCTGTGATCATTTTCTCCCTATGCACTCGAGCGCTCGAGTATCAGGCCTTCAACTCCGACGGGAAAACTGCAGGGCGGGATATTCTGGGTGCAATGATGTATTCTTGTGTTGTTTGGGTCGTGAACTTGCAAATGGCGCTCGCTCTCCCGATCAACGAGCATGGGTTCCACCGCACGGTTAGCAGCCGAAAGGTGCCACTTAAAACAGATGAAACCATTGAATATGATGCTGTTATCTTGCTCTTGGACAAATCTGACATGAACCAACATAGCCTGTCCCAAGAAAATACAGAAGAAGCATCAGCTCCAAGTTCTTGTGTACATTAA 3351 41.96 MSSGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPKCFEAEIRSYIDNYVSTTKYTLATFLPKSLFEQFRRVANFYFLVTGILAFTPLAPYTAVSAIVPLILVISATMIKEGIEDWRRKKQDLEVNNRKVKVHHGDGVFGYTEWKNLMVGDIVKVEKDGFFPADIILLSSSYEDAICYVETTNLDGETNLKLKQALEVTSHMNEDFIFNSFKAILKCEDPNANLYSFVGSLELEEQQYPLSPQQLLLRGSKLRNTDYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERKMDKIIYFLFCLLFLLALVGSIVFGVVTEDDLENGRMKRWYLRPDDARVFYDPKRAQMAAIFHFLTALMLYNYFIPISLYVSIEIVKILQSMFINQDINMYYEEANKPARARTSNLNEELGQVDTILTDKTGTLTCNSMEFIKCSVAGRAYGQVNEGKHHEDVKNQASHIKGFNFKDDRIMNGNWVNEPHANVIETFLRVLATCHTAIPEINEDNGEVSYEAESPDEAAFVIAARELGFEFYKRTQTSISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRNEEAKTLLFCKGADSVMFERLGKNGRVFEEETKEHVIEYADAGLRTLILAYRELDDEEYREFDSKFTMAKNSVSVDRESLINQVTDKIERNLILLGATAVEDKLQNGVPECIDRLAQAGIKIWVLTGDKMETAINIGFSCRLLRQDMKQIVITLETSEIQASRQSVLDQITRGRAQIASPSGISEAFALIIDGKSLSYALEDSMKALFLEVAIHCASVICCRSSPKQKALVTRLVKCGTEKTTLAIGDGANDVGMLQEADIGVGISGVEGMQVLKNADDPYVLMIQILQILTSSFMSTQAVMSSDVVIAQFKYLEHLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQFPLLYQQGVQNVLFSWVRILSWMFNGLCSAVIIFSLCTRALEYQAFNSDGKTAGRDILGAMMYSCVVWVVNLQMALALPINEHGFHRTVSSRKVPLKTDETIEYDAVILLLDKSDMNQHSLSQENTEEASAPSSCVH 1116
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8291914 8297620 + Cp4.1LG01g13410.1 Cpe01g01379 462692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01379 1116 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 358 486 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe01g01379 1116 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Cpe01g01379 1116 Pfam Phospholipid-translocating P-type ATPase C-terminal 884 1056 IPR032630 -
Cpe01g01379 1116 SUPERFAMILY HAD-like 412 871 IPR036412 -
Cpe01g01379 1116 Gene3D - 114 286 - -
Cpe01g01379 1116 CDD P-type_ATPase_APLT_Dnf-like 57 1013 - -
Cpe01g01379 1116 SFLD Haloacid Dehalogenase 408 907 - -
Cpe01g01379 1116 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1054 IPR023298 -
Cpe01g01379 1116 Coils Coil 123 143 - -
Cpe01g01379 1116 Gene3D - 674 868 IPR023214 -
Cpe01g01379 1116 Gene3D - 523 654 IPR023299 GO:0000166
Cpe01g01379 1116 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 646 IPR023299 GO:0000166
Cpe01g01379 1116 SUPERFAMILY Calcium ATPase, transduction domain A 141 283 IPR008250 -
Cpe01g01379 1116 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 879 1057 - -
Cpe01g01379 1116 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 861 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe01g01379 1116 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 861 - -
Cpe01g01379 1116 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 879 1057 - -
Cpe01g01379 1116 SFLD p-type atpase 408 907 IPR044492 -
Cpe01g01379 1116 Pfam Cation transport ATPase (P-type) 500 605 - -
Cpe01g01379 1116 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Cpe01g01379 1116 PRINTS P-type cation-transporting ATPase superfamily signature 829 848 - -
Cpe01g01379 1116 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Cpe01g01379 1116 Pfam E1-E2 ATPase 137 359 - -
Cpe01g01379 1116 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 1 861 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01379 Cpe13g00024 CCT
Cpe01g01379 Cpe13g00024 ECH
Cpe01g01379 Cpe09g00258 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01379 Cpe-Chr1:8291914 Cpe20g00099 Cpe-Chr20:522155 0 dispersed
Cpe01g01379 Cpe-Chr1:8291914 Cpe13g00024 Cpe-Chr13:204020 0 wgd
Cpe01g01379 Cpe-Chr1:8291914 Cpe09g00258 Cpe-Chr9:1499250 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01379 K01530 - csv:101207148 1822.75