Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01379 | ATGAGCAGCGGCAGAAGGAGAAAGCTTCATTTTAGCAAGATCTACTCGTTTGCTTGCGGGAAAGCTTCTTTAAAGGATGATCATTCACAACTTGGGGGACCTGGGTTCTCTCGTGTTGTTTTCTGTAATGAACCAAAGTGTTTTGAGGCAGAAATTCGTAGCTACATAGACAATTATGTTAGTACCACCAAGTATACTTTAGCTACTTTCCTGCCTAAGTCATTGTTTGAGCAATTCAGGAGAGTGGCCAATTTCTACTTTTTAGTCACTGGGATCCTTGCTTTTACTCCCCTTGCTCCTTACACCGCTGTCAGCGCCATCGTCCCTCTTATTCTCGTCATCTCGGCGACAATGATCAAAGAAGGGATCGAGGATTGGAGGCGCAAAAAACAGGATCTTGAGGTAAACAATAGAAAGGTAAAAGTGCACCATGGAGATGGAGTTTTTGGTTATACAGAGTGGAAGAATCTGATGGTTGGTGATATTGTGAAAGTAGAGAAGGATGGATTCTTTCCAGCTGATATTATCTTGCTTTCATCAAGTTACGAGGACGCAATCTGCTACGTTGAGACGACGAACCTGGACGGCGAGACGAATTTGAAACTAAAACAAGCGTTGGAGGTAACGTCGCATATGAACGAAGATTTTATCTTCAATAGCTTTAAGGCTATCCTAAAATGTGAGGATCCAAATGCAAATTTATACAGTTTTGTTGGTAGTTTAGAGCTGGAAGAACAACAATATCCTCTGTCTCCTCAACAGCTACTCCTTCGAGGCTCTAAGCTTCGGAATACTGATTATATATACGGGGTCGTTGTCTTTACGGGTCGTGACACGAAGGTTATTCAAAATTCTACTGATCCACCTTCAAAGCGAAGCAAAGTTGAGAGGAAAATGGACAAGATTATATATTTTTTGTTCTGTCTTCTGTTTTTGCTTGCTCTTGTAGGATCTATAGTTTTTGGCGTTGTGACTGAGGATGATTTGGAGAATGGGAGAATGAAACGATGGTATCTGAGGCCTGATGATGCTAGAGTTTTCTATGATCCAAAAAGGGCTCAAATGGCTGCAATTTTCCATTTTCTTACAGCACTGATGTTATATAACTACTTCATTCCAATATCACTCTATGTATCAATAGAAATTGTGAAAATTCTTCAGAGCATGTTCATCAATCAAGATATTAATATGTATTATGAAGAAGCGAATAAACCAGCTCGTGCTCGCACCTCGAATTTGAATGAAGAACTCGGTCAAGTTGATACGATACTCACTGACAAGACGGGAACTTTGACATGTAATTCAATGGAGTTCATTAAGTGTTCTGTGGCAGGGAGGGCTTATGGCCAGGTAAATGAGGGGAAGCACCATGAGGATGTCAAGAATCAAGCTTCACATATCAAAGGTTTTAACTTTAAGGATGATAGGATTATGAATGGGAATTGGGTTAATGAGCCTCATGCCAATGTCATCGAAACTTTTCTTCGTGTTCTTGCAACTTGTCATACGGCGATACCCGAAATCAATGAGGACAATGGAGAGGTTTCTTATGAGGCCGAATCTCCAGACGAAGCAGCATTCGTGATCGCTGCTAGAGAACTCGGATTCGAGTTCTACAAAAGAACACAGACAAGTATATCACTGCATGAGTTTGATCCTTCATTGGGCAAGAAAGTTGATAGGACATATAAACTGCTGCATGTTTTGGAGTTCAATAGCTCAAGAAAGCGGATGTCTGTCATAGTAAGAAATGAAGAGGCTAAGACATTGTTATTCTGTAAAGGTGCAGACAGTGTTATGTTTGAAAGGCTTGGAAAGAATGGGAGGGTGTTTGAGGAGGAGACCAAGGAACATGTCATTGAGTATGCTGATGCAGGATTGAGGACTTTGATACTTGCCTATCGCGAGCTCGACGACGAAGAATACAGAGAGTTTGATAGCAAGTTCACTATGGCGAAAAACTCGGTTAGTGTAGACCGAGAATCGTTGATTAATCAAGTGACCGATAAAATCGAAAGGAATCTGATTCTTCTTGGTGCCACTGCTGTTGAGGACAAGCTTCAAAATGGGGTTCCTGAGTGCATTGATAGGCTTGCTCAAGCAGGAATAAAGATTTGGGTATTGACTGGGGACAAAATGGAGACCGCTATCAATATTGGTTTTTCCTGTAGATTACTGAGACAAGATATGAAGCAGATTGTAATTACACTCGAGACGTCGGAAATTCAGGCATCGAGGCAAAGCGTCCTCGATCAAATTACTCGAGGGAGAGCTCAGATCGCTTCACCAAGTGGGATATCTGAAGCATTTGCATTAATCATTGATGGAAAATCACTTTCTTATGCTTTAGAGGACAGCATGAAGGCATTGTTTCTCGAGGTAGCAATACATTGTGCTTCTGTTATTTGCTGCCGTTCATCTCCAAAACAGAAGGCACTGGTAACGAGGTTAGTTAAATGTGGAACAGAGAAAACAACTTTAGCTATTGGCGACGGTGCCAACGACGTCGGAATGCTTCAAGAAGCAGACATTGGAGTTGGAATTAGCGGTGTTGAAGGAATGCAGGTGCTGAAGAACGCAGACGACCCATATGTTTTGATGATTCAAATTCTTCAAATATTAACGAGTTCTTTTATGTCTACCCAGGCCGTTATGTCGAGCGACGTTGTGATAGCACAATTCAAATATTTAGAGCACCTGCTTCTTGTTCATGGACATTGGTGCTATAGAAGGATATCATCAATGATTTGCTACTTTTTCTACAAGAACATTACTTTTGGTTTTACAATATTCTTATACGAAGCATTCACATCATTCTCTGGGCAGCCTGCATATAATGATTGGTTTCTATCGCTTTACAATGTGTTCTTCTCGTCGCTTCCAGTGGTAGCTTTGGGCGTTTTTGATCAGGATGTTTCTGCAAGACTCTGCCTCCAGTTTCCTCTCTTATACCAACAAGGAGTGCAGAATGTTCTATTCAGCTGGGTCCGAATTCTCAGTTGGATGTTTAATGGGCTGTGCAGTGCTGTGATCATTTTCTCCCTATGCACTCGAGCGCTCGAGTATCAGGCCTTCAACTCCGACGGGAAAACTGCAGGGCGGGATATTCTGGGTGCAATGATGTATTCTTGTGTTGTTTGGGTCGTGAACTTGCAAATGGCGCTCGCTCTCCCGATCAACGAGCATGGGTTCCACCGCACGGTTAGCAGCCGAAAGGTGCCACTTAAAACAGATGAAACCATTGAATATGATGCTGTTATCTTGCTCTTGGACAAATCTGACATGAACCAACATAGCCTGTCCCAAGAAAATACAGAAGAAGCATCAGCTCCAAGTTCTTGTGTACATTAA | 3351 | 41.96 | MSSGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPKCFEAEIRSYIDNYVSTTKYTLATFLPKSLFEQFRRVANFYFLVTGILAFTPLAPYTAVSAIVPLILVISATMIKEGIEDWRRKKQDLEVNNRKVKVHHGDGVFGYTEWKNLMVGDIVKVEKDGFFPADIILLSSSYEDAICYVETTNLDGETNLKLKQALEVTSHMNEDFIFNSFKAILKCEDPNANLYSFVGSLELEEQQYPLSPQQLLLRGSKLRNTDYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERKMDKIIYFLFCLLFLLALVGSIVFGVVTEDDLENGRMKRWYLRPDDARVFYDPKRAQMAAIFHFLTALMLYNYFIPISLYVSIEIVKILQSMFINQDINMYYEEANKPARARTSNLNEELGQVDTILTDKTGTLTCNSMEFIKCSVAGRAYGQVNEGKHHEDVKNQASHIKGFNFKDDRIMNGNWVNEPHANVIETFLRVLATCHTAIPEINEDNGEVSYEAESPDEAAFVIAARELGFEFYKRTQTSISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRNEEAKTLLFCKGADSVMFERLGKNGRVFEEETKEHVIEYADAGLRTLILAYRELDDEEYREFDSKFTMAKNSVSVDRESLINQVTDKIERNLILLGATAVEDKLQNGVPECIDRLAQAGIKIWVLTGDKMETAINIGFSCRLLRQDMKQIVITLETSEIQASRQSVLDQITRGRAQIASPSGISEAFALIIDGKSLSYALEDSMKALFLEVAIHCASVICCRSSPKQKALVTRLVKCGTEKTTLAIGDGANDVGMLQEADIGVGISGVEGMQVLKNADDPYVLMIQILQILTSSFMSTQAVMSSDVVIAQFKYLEHLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQFPLLYQQGVQNVLFSWVRILSWMFNGLCSAVIIFSLCTRALEYQAFNSDGKTAGRDILGAMMYSCVVWVVNLQMALALPINEHGFHRTVSSRKVPLKTDETIEYDAVILLLDKSDMNQHSLSQENTEEASAPSSCVH | 1116 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8291914 | 8297620 | + | Cp4.1LG01g13410.1 | Cpe01g01379 | 462692 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01379 | 1116 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 358 | 486 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe01g01379 | 1116 | Pfam | Phospholipid-translocating ATPase N-terminal | 41 | 106 | IPR032631 | - | |
Cpe01g01379 | 1116 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 884 | 1056 | IPR032630 | - | |
Cpe01g01379 | 1116 | SUPERFAMILY | HAD-like | 412 | 871 | IPR036412 | - | |
Cpe01g01379 | 1116 | Gene3D | - | 114 | 286 | - | - | |
Cpe01g01379 | 1116 | CDD | P-type_ATPase_APLT_Dnf-like | 57 | 1013 | - | - | |
Cpe01g01379 | 1116 | SFLD | Haloacid Dehalogenase | 408 | 907 | - | - | |
Cpe01g01379 | 1116 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 54 | 1054 | IPR023298 | - | |
Cpe01g01379 | 1116 | Coils | Coil | 123 | 143 | - | - | |
Cpe01g01379 | 1116 | Gene3D | - | 674 | 868 | IPR023214 | - | |
Cpe01g01379 | 1116 | Gene3D | - | 523 | 654 | IPR023299 | GO:0000166 | |
Cpe01g01379 | 1116 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 431 | 646 | IPR023299 | GO:0000166 | |
Cpe01g01379 | 1116 | SUPERFAMILY | Calcium ATPase, transduction domain A | 141 | 283 | IPR008250 | - | |
Cpe01g01379 | 1116 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED | 879 | 1057 | - | - | |
Cpe01g01379 | 1116 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 55 | 861 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cpe01g01379 | 1116 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 1 | 861 | - | - | |
Cpe01g01379 | 1116 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 879 | 1057 | - | - | |
Cpe01g01379 | 1116 | SFLD | p-type atpase | 408 | 907 | IPR044492 | - | |
Cpe01g01379 | 1116 | Pfam | Cation transport ATPase (P-type) | 500 | 605 | - | - | |
Cpe01g01379 | 1116 | PRINTS | P-type cation-transporting ATPase superfamily signature | 424 | 438 | - | - | |
Cpe01g01379 | 1116 | PRINTS | P-type cation-transporting ATPase superfamily signature | 829 | 848 | - | - | |
Cpe01g01379 | 1116 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 426 | 432 | IPR018303 | - | |
Cpe01g01379 | 1116 | Pfam | E1-E2 ATPase | 137 | 359 | - | - | |
Cpe01g01379 | 1116 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED | 1 | 861 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g01379 | Cpe13g00024 | CCT | |
Cpe01g01379 | Cpe13g00024 | ECH | |
Cpe01g01379 | Cpe09g00258 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01379 | Cpe-Chr1:8291914 | Cpe20g00099 | Cpe-Chr20:522155 | 0 | dispersed | |
Cpe01g01379 | Cpe-Chr1:8291914 | Cpe13g00024 | Cpe-Chr13:204020 | 0 | wgd | |
Cpe01g01379 | Cpe-Chr1:8291914 | Cpe09g00258 | Cpe-Chr9:1499250 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01379 | K01530 | - | csv:101207148 | 1822.75 |