Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01425 | ATGTCATTGATGCAGGTTCGGCAAGATGGATATTTTCCTGCGGATATTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACTGCTAACCTGGATGGGGAGACAAATTTGAAGATTAGGAAGGCCCTGGAAAAGACGTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGCGAGCAACCAAACAATTCACTCTACACTTTCACAGGCAATGTTATTATTCAGAACCAAACGTTACCTCTCAGCCCAAACCAACTTTTATTGCGAGGATGCAGTCTCAGGAACACTGAGTATATAGTTGGGGCTGTTATTTTTACTGGCCATGAAACAAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGGAGTACCCTAGAAAAGAAACTCGACAAACTTATACTTACACTATTTGCTACTCTCTTTATGATGTGTTTGATTGGAGCCATTGGCAGTGGCGTGTTTGTAAACCAAAAGTACTACTACCTAGCTCTTGATAAGGGAGGGGAAAACCAATTCAACCCTCGCAATCGATTCCTGGTTGTCGTTTTGACCATGTTTACTCTGATTACTCTGTACTCGACAATTATTCCTATTTCTCTATATGTTTCCATTGAGATGATCAAATTTATTCAATCAACACAATATATCAACAAGGATCTGAATATGTTCCATGCTGATAGCAATACCCCTGCACTGGCTAGAACTTCTAATCTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACTAGGAATCTAATGGAGTTCTTTAATGGCGTGTTTGTAAACCAAAAGTACTACTACCTAGCTCTTGATAAGGGAGGGGAAAACCAATTCAACCCTCGCAATCGATTCCTGGTTGTCGTTTTGACCATGTTTACTCTGATTACTCTGTACTCGACAATTATTCCTATTTCTCTATATGTTTCCATTGAGATGATCAAATTTATTCAATCAACACAATATATCAACAAGGATCTGAATATGTTCCATGCTGATAGCAATACCCCTGCACTGGCTAGAACTTCTAATCTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACTAGGAATCTAATGGAGTTCTTTAAGTGTTCAATTGGTGGAGAGGTTTATGGCACTGGTATCACTGAAATAGAGAGGGGAATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGTGCACAAATCAGCAAATGCTGTACAAGAAAAGGGATTTAACTTCGATGATGCTAGGCTGATGAGAGGAGCATGGAGAAATGAACCCAACTCTGATCTTTGTAAGGAATTTTTCAGATGCCTTGCTATTTGTCATACTGTACTCCCTGAGGGAGACGAATCCCCAGAAAAGATCATTTATCAAGCTGCATCACCTGATGAGGCTGCCTTAGTAACTGCGGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGCACACCTACTACAATATATGTTCGAGAATCTCATGTTGAGAAGATGGGAAAAATCCAAGATGTTTCATATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGGAAGCGTCAGTCTGTTGTGTGTCGTTATTCTGATGGTAGGCTTGTCTTGTACTGCAAGGGTGCTGATACCGTAGTATATGAGAGATTGGCTGGTGGAAATGATGATTTGAAGAATGTAACTAGGGAACACTTGGAGAAATTTGGATCTTCCGGTTTGAGAACCCTATGCCTTGCTTACAGAGATTTGCATCCTGACGTGTATGAAAGCTGGAATGAGAAGTTCATTCAAGCTAAGTCTTCATTAAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGACCTTATTTTGATTGGCTGTACTGCTATAGAAGATAAACTTCAAGAAGGAGTACCAAACTGTATACAGACGCTTTCTAGAGCTGGTATCAAGATTTGGGTGCTAACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCGTGCAATTTAATAAACAATGAAATGAAGCAATTTATTATCAGTTCAGAAACGGATGCAATCCGAGAAGTTGAAAACAGGGGTGACCAAGTAGAACTTGCACGTTTTACTAGAGAAGAAGTAAAAAGGGAACTGAAGCATTGTCTTGAGGAAGCGCAGCGGTGTTTACAATCTGTGTCTCCACCAAAATTAGCACTTGTTATAGATGGAAAATGTTTGATGTATGCATTAGATCCAAGTCTGCGAGTTACTTTACTAAGCTTGAGCTTGAATTGTAGTTCAGTTGTTTGCTGCCGGGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTCTGGTGAAGAAAGGTGCACAGAAAATAACACTCAGTATTGGTGATGGTGCTAATGATGTTAGCATGATTCAAGCATCTCACGTGGGCGTTGGAATAAGTGGACAGGAGGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCTCAGTTTCGCTTTCTCACAGATTTACTTCTTTTTTGGTTCACCTTCCAAACTGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAGTCGCTGTATAATGTCATATTTACCGCCCTACCTGTAATAATTGTTGGACTATTTGACAAGGATGTCAGTGCTTCCCTATCCAAAAAGTACCCTGAGCTCTACAGAGAGGGAATAAGAAATGCATTTTTTAAGTGGAGAGTTGTGACAACTTGGGCTTTCTTTTCCATCTACCAATCTTTAGTCTTTTATTTTTTTATAACCGTTTCTAGTTCCAGCAGTCAATCGTCATCTGGCAGGGTGTTTGGTCTGTGGGATATCAGCACGATGACTTTCACATGCATTGTAGTGACTGTGAATTTGCGTCTGCTTATGATCTGCAATTCAATTACCCGGTGGCATTACATTACGGTTGGGGGAAGCATTTTAGCTTGGTTCCTATTTATTTTCTTATACTCTGGTATTATCACACCACATGATAGGCAGGAAAATGTATATTTCGTCATATATGTCTTAATGAGTACATTATACTTTTATGTAGCTGTTCTTCTTGTCCCCATTGTTGCACTTCTCTGTGATTTCGCGTACCAAGGCATTCAGAGATGGTTTTTCCCCTACGATTATCAGATAGTACAAGAAATACATAGACATGAACCTGAAGGCAGAGGTACGGCAGGATTGCTGGAGATTCAGAACCATCTTACACCGGAGGAGGCAAGAAGTTATGCCATGTCTCAACTCCCTCGAGAATTATCGAAGCACACTGGCTTTGCTTTCGACTCACCGGGCTACGAGTCATTTTTTGCTGCACAGCTTGGTATTTATGCCCCACAGAAAGCATGGGATGTTGCTAAGAGAGCCAGTGTGAAATTGAGGCCAAAGAATAGGGAAAAAAAGTGA | 3453 | 40.25 | MSLMQVRQDGYFPADILFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQNQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFMMCLIGAIGSGVFVNQKYYYLALDKGGENQFNPRNRFLVVVLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFNGVFVNQKYYYLALDKGGENQFNPRNRFLVVVLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEVHKSANAVQEKGFNFDDARLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKIIYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRYSDGRLVLYCKGADTVVYERLAGGNDDLKNVTREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVELARFTREEVKRELKHCLEEAQRCLQSVSPPKLALVIDGKCLMYALDPSLRVTLLSLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQASHVGVGISGQEGMQAVMASDFAIAQFRFLTDLLLFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNAFFKWRVVTTWAFFSIYQSLVFYFFITVSSSSSQSSSGRVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLFIFLYSGIITPHDRQENVYFVIYVLMSTLYFYVAVLLVPIVALLCDFAYQGIQRWFFPYDYQIVQEIHRHEPEGRGTAGLLEIQNHLTPEEARSYAMSQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVAKRASVKLRPKNREKK | 1150 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8552645 | 8564244 | - | Cp4.1LG01g12800.1 | Cpe01g01425 | 462738 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01425 | 1150 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 262 | 268 | IPR018303 | - | |
Cpe01g01425 | 1150 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 851 | 1056 | IPR032630 | - | |
Cpe01g01425 | 1150 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 282 | 852 | - | - | |
Cpe01g01425 | 1150 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 4 | 277 | - | - | |
Cpe01g01425 | 1150 | SUPERFAMILY | HAD-like | 362 | 849 | IPR036412 | - | |
Cpe01g01425 | 1150 | SUPERFAMILY | Calcium ATPase, transduction domain A | 4 | 123 | IPR008250 | - | |
Cpe01g01425 | 1150 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 779 | 847 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cpe01g01425 | 1150 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 376 | 382 | IPR018303 | - | |
Cpe01g01425 | 1150 | Gene3D | - | 2 | 127 | - | - | |
Cpe01g01425 | 1150 | SFLD | Haloacid Dehalogenase | 356 | 851 | - | - | |
Cpe01g01425 | 1150 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 127 | 254 | IPR023298 | - | |
Cpe01g01425 | 1150 | PRINTS | P-type cation-transporting ATPase superfamily signature | 806 | 825 | - | - | |
Cpe01g01425 | 1150 | PRINTS | P-type cation-transporting ATPase superfamily signature | 260 | 274 | - | - | |
Cpe01g01425 | 1150 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 295 | 852 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cpe01g01425 | 1150 | Gene3D | - | 485 | 639 | IPR023299 | GO:0000166 | |
Cpe01g01425 | 1150 | Gene3D | - | 640 | 846 | IPR023214 | - | |
Cpe01g01425 | 1150 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 4 | 277 | - | - | |
Cpe01g01425 | 1150 | SFLD | p-type atpase | 356 | 851 | IPR044492 | - | |
Cpe01g01425 | 1150 | Pfam | Cation transport ATPase (P-type) | 475 | 566 | - | - | |
Cpe01g01425 | 1150 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 439 | 645 | IPR023299 | GO:0000166 | |
Cpe01g01425 | 1150 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 309 | 1056 | IPR023298 | - | |
Cpe01g01425 | 1150 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 852 | 1143 | - | - | |
Cpe01g01425 | 1150 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 852 | 1143 | - | - | |
Cpe01g01425 | 1150 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 282 | 852 | - | - | |
Cpe01g01425 | 1150 | CDD | P-type_ATPase_APLT_Dnf-like | 3 | 937 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01425 | Cpe-Chr1:8552645 | Cpe20g00099 | Cpe-Chr20:522155 | 7.33E-74 | dispersed | |
Cpe01g00277 | Cpe-Chr1:1568832 | Cpe01g01425 | Cpe-Chr1:8552645 | 3.05E-175 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01425 | K14802 | - | csv:101207069 | 1657.5 |