Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01425 ATGTCATTGATGCAGGTTCGGCAAGATGGATATTTTCCTGCGGATATTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACTGCTAACCTGGATGGGGAGACAAATTTGAAGATTAGGAAGGCCCTGGAAAAGACGTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGCGAGCAACCAAACAATTCACTCTACACTTTCACAGGCAATGTTATTATTCAGAACCAAACGTTACCTCTCAGCCCAAACCAACTTTTATTGCGAGGATGCAGTCTCAGGAACACTGAGTATATAGTTGGGGCTGTTATTTTTACTGGCCATGAAACAAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGGAGTACCCTAGAAAAGAAACTCGACAAACTTATACTTACACTATTTGCTACTCTCTTTATGATGTGTTTGATTGGAGCCATTGGCAGTGGCGTGTTTGTAAACCAAAAGTACTACTACCTAGCTCTTGATAAGGGAGGGGAAAACCAATTCAACCCTCGCAATCGATTCCTGGTTGTCGTTTTGACCATGTTTACTCTGATTACTCTGTACTCGACAATTATTCCTATTTCTCTATATGTTTCCATTGAGATGATCAAATTTATTCAATCAACACAATATATCAACAAGGATCTGAATATGTTCCATGCTGATAGCAATACCCCTGCACTGGCTAGAACTTCTAATCTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACTAGGAATCTAATGGAGTTCTTTAATGGCGTGTTTGTAAACCAAAAGTACTACTACCTAGCTCTTGATAAGGGAGGGGAAAACCAATTCAACCCTCGCAATCGATTCCTGGTTGTCGTTTTGACCATGTTTACTCTGATTACTCTGTACTCGACAATTATTCCTATTTCTCTATATGTTTCCATTGAGATGATCAAATTTATTCAATCAACACAATATATCAACAAGGATCTGAATATGTTCCATGCTGATAGCAATACCCCTGCACTGGCTAGAACTTCTAATCTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACTAGGAATCTAATGGAGTTCTTTAAGTGTTCAATTGGTGGAGAGGTTTATGGCACTGGTATCACTGAAATAGAGAGGGGAATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGTGCACAAATCAGCAAATGCTGTACAAGAAAAGGGATTTAACTTCGATGATGCTAGGCTGATGAGAGGAGCATGGAGAAATGAACCCAACTCTGATCTTTGTAAGGAATTTTTCAGATGCCTTGCTATTTGTCATACTGTACTCCCTGAGGGAGACGAATCCCCAGAAAAGATCATTTATCAAGCTGCATCACCTGATGAGGCTGCCTTAGTAACTGCGGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGCACACCTACTACAATATATGTTCGAGAATCTCATGTTGAGAAGATGGGAAAAATCCAAGATGTTTCATATGAAATTCTCAATGTACTTGAGTTCAATAGTGTAAGGAAGCGTCAGTCTGTTGTGTGTCGTTATTCTGATGGTAGGCTTGTCTTGTACTGCAAGGGTGCTGATACCGTAGTATATGAGAGATTGGCTGGTGGAAATGATGATTTGAAGAATGTAACTAGGGAACACTTGGAGAAATTTGGATCTTCCGGTTTGAGAACCCTATGCCTTGCTTACAGAGATTTGCATCCTGACGTGTATGAAAGCTGGAATGAGAAGTTCATTCAAGCTAAGTCTTCATTAAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGACCTTATTTTGATTGGCTGTACTGCTATAGAAGATAAACTTCAAGAAGGAGTACCAAACTGTATACAGACGCTTTCTAGAGCTGGTATCAAGATTTGGGTGCTAACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCGTGCAATTTAATAAACAATGAAATGAAGCAATTTATTATCAGTTCAGAAACGGATGCAATCCGAGAAGTTGAAAACAGGGGTGACCAAGTAGAACTTGCACGTTTTACTAGAGAAGAAGTAAAAAGGGAACTGAAGCATTGTCTTGAGGAAGCGCAGCGGTGTTTACAATCTGTGTCTCCACCAAAATTAGCACTTGTTATAGATGGAAAATGTTTGATGTATGCATTAGATCCAAGTCTGCGAGTTACTTTACTAAGCTTGAGCTTGAATTGTAGTTCAGTTGTTTGCTGCCGGGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTCTGGTGAAGAAAGGTGCACAGAAAATAACACTCAGTATTGGTGATGGTGCTAATGATGTTAGCATGATTCAAGCATCTCACGTGGGCGTTGGAATAAGTGGACAGGAGGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCTCAGTTTCGCTTTCTCACAGATTTACTTCTTTTTTGGTTCACCTTCCAAACTGGATTTTCTGGTCAAAGATTCTATGATGATTGGTTCCAGTCGCTGTATAATGTCATATTTACCGCCCTACCTGTAATAATTGTTGGACTATTTGACAAGGATGTCAGTGCTTCCCTATCCAAAAAGTACCCTGAGCTCTACAGAGAGGGAATAAGAAATGCATTTTTTAAGTGGAGAGTTGTGACAACTTGGGCTTTCTTTTCCATCTACCAATCTTTAGTCTTTTATTTTTTTATAACCGTTTCTAGTTCCAGCAGTCAATCGTCATCTGGCAGGGTGTTTGGTCTGTGGGATATCAGCACGATGACTTTCACATGCATTGTAGTGACTGTGAATTTGCGTCTGCTTATGATCTGCAATTCAATTACCCGGTGGCATTACATTACGGTTGGGGGAAGCATTTTAGCTTGGTTCCTATTTATTTTCTTATACTCTGGTATTATCACACCACATGATAGGCAGGAAAATGTATATTTCGTCATATATGTCTTAATGAGTACATTATACTTTTATGTAGCTGTTCTTCTTGTCCCCATTGTTGCACTTCTCTGTGATTTCGCGTACCAAGGCATTCAGAGATGGTTTTTCCCCTACGATTATCAGATAGTACAAGAAATACATAGACATGAACCTGAAGGCAGAGGTACGGCAGGATTGCTGGAGATTCAGAACCATCTTACACCGGAGGAGGCAAGAAGTTATGCCATGTCTCAACTCCCTCGAGAATTATCGAAGCACACTGGCTTTGCTTTCGACTCACCGGGCTACGAGTCATTTTTTGCTGCACAGCTTGGTATTTATGCCCCACAGAAAGCATGGGATGTTGCTAAGAGAGCCAGTGTGAAATTGAGGCCAAAGAATAGGGAAAAAAAGTGA 3453 40.25 MSLMQVRQDGYFPADILFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQNQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFMMCLIGAIGSGVFVNQKYYYLALDKGGENQFNPRNRFLVVVLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFNGVFVNQKYYYLALDKGGENQFNPRNRFLVVVLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEVHKSANAVQEKGFNFDDARLMRGAWRNEPNSDLCKEFFRCLAICHTVLPEGDESPEKIIYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRYSDGRLVLYCKGADTVVYERLAGGNDDLKNVTREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKDLILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVELARFTREEVKRELKHCLEEAQRCLQSVSPPKLALVIDGKCLMYALDPSLRVTLLSLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQASHVGVGISGQEGMQAVMASDFAIAQFRFLTDLLLFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIRNAFFKWRVVTTWAFFSIYQSLVFYFFITVSSSSSQSSSGRVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLFIFLYSGIITPHDRQENVYFVIYVLMSTLYFYVAVLLVPIVALLCDFAYQGIQRWFFPYDYQIVQEIHRHEPEGRGTAGLLEIQNHLTPEEARSYAMSQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVAKRASVKLRPKNREKK 1150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8552645 8564244 - Cp4.1LG01g12800.1 Cpe01g01425 462738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01425 1150 ProSitePatterns E1-E2 ATPases phosphorylation site. 262 268 IPR018303 -
Cpe01g01425 1150 Pfam Phospholipid-translocating P-type ATPase C-terminal 851 1056 IPR032630 -
Cpe01g01425 1150 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 282 852 - -
Cpe01g01425 1150 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 277 - -
Cpe01g01425 1150 SUPERFAMILY HAD-like 362 849 IPR036412 -
Cpe01g01425 1150 SUPERFAMILY Calcium ATPase, transduction domain A 4 123 IPR008250 -
Cpe01g01425 1150 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 779 847 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe01g01425 1150 ProSitePatterns E1-E2 ATPases phosphorylation site. 376 382 IPR018303 -
Cpe01g01425 1150 Gene3D - 2 127 - -
Cpe01g01425 1150 SFLD Haloacid Dehalogenase 356 851 - -
Cpe01g01425 1150 SUPERFAMILY Calcium ATPase, transmembrane domain M 127 254 IPR023298 -
Cpe01g01425 1150 PRINTS P-type cation-transporting ATPase superfamily signature 806 825 - -
Cpe01g01425 1150 PRINTS P-type cation-transporting ATPase superfamily signature 260 274 - -
Cpe01g01425 1150 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 295 852 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe01g01425 1150 Gene3D - 485 639 IPR023299 GO:0000166
Cpe01g01425 1150 Gene3D - 640 846 IPR023214 -
Cpe01g01425 1150 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 277 - -
Cpe01g01425 1150 SFLD p-type atpase 356 851 IPR044492 -
Cpe01g01425 1150 Pfam Cation transport ATPase (P-type) 475 566 - -
Cpe01g01425 1150 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 439 645 IPR023299 GO:0000166
Cpe01g01425 1150 SUPERFAMILY Calcium ATPase, transmembrane domain M 309 1056 IPR023298 -
Cpe01g01425 1150 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 852 1143 - -
Cpe01g01425 1150 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 852 1143 - -
Cpe01g01425 1150 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 282 852 - -
Cpe01g01425 1150 CDD P-type_ATPase_APLT_Dnf-like 3 937 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01425 Cpe-Chr1:8552645 Cpe20g00099 Cpe-Chr20:522155 7.33E-74 dispersed
Cpe01g00277 Cpe-Chr1:1568832 Cpe01g01425 Cpe-Chr1:8552645 3.05E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01425 K14802 - csv:101207069 1657.5