Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01481 ATGACGAGAGGTTTTAGAAGACGAAATTTGTGTTCAAGGCCCATAGATCGTCTCCGATTCCAGGCATCGGCGGACGGTGCTCCGAAATCGGGATTCCTCAGAGATATGAAGGTGAAGGAGATCTTTACTTATTTGCTTATAGGTCTTCCGTTGGTCGTTTTTGTTGGTTTGGTGTTCAGGAATCCGGCGGCGGATCTGTCATTGGGTTTTGCTGAAGCCAGAGCATTGGAAAGAGTGGTCACTAATGGCAGTTCTGAGAGTTCAGGTTCAGAAAACGGTTTCTCTAGACTTTCCAATAGAGACAAGCTTATTGGAGGCCTTCTCATTCCTGGATTTGATGAAGGATCATGCTTGAGTAGATATCAATCCAGTTTATATCGAAGAACTTCGACCCACAGACCGTCTCCGTACCTCATCTCGAAGCTTAGAGACTACGAAGCGCTTCATCGACGATGTGGTCCGCATACAAAACCATATGATGAAGCAGTAGAGCAGCTCAGATCTGGCAGTAGTGTTAGTTTGACAGAGTGTAAATATGTTGTGTGGATGTCTTATAGTGGCTTGGGAAATAAGATACTCACTTTGGCTTCTGCATTTCTCTATGCCGTTCTTACCGATCGTGTCTTGCTTGTCGATCCGGGGAAGGATATGGCTGATCTATTTTGTGAGCCCTTCCCAGAAAAAACTTGGCTGCTACCAAATGACTTCCCCTTGATGGATCAATTCAGCAACTTTAATCAGAAATCTCCTAATTGTCATGGATATATGCTTAAGATGAACACGCTAAACGAATCGACAGAAGCGCTCCCATCCTATCTATACCTACATTTGGTTCATGATTATGATGATCATGACAAGCTTTTCTTCTGTGATCAAGAACAGGCTCTTTTAAGTAGGGTCCCTTGGCTGATACTCAAGACAGATAACTACTTTGTTCCATCGCTCTTCCTGATCCCGTCTTTCGAGCACGAACTGAGTAACTTATTCCCCCAAAAAGACAACGTGTTTCATCATCTGGGTCGATATCTTTTCCACCCATCGAATCACGTTTGGGGACTGATTACGAGATACTACGAAGCATATCTAACAAGTGCAGATGAATTGATAGGAATTCAAGTAAGAGTGTTCGAGATTGGATCGGGACCATTCGAACATATAATGGATCAGATTTTAAGCTGTACTCTTCAGGAGAAGATACTTCCCGACGTAGACAAGGAAGGCTTCTCTTCGGTTCCCTTGGAACGCCCAAGAGTGAAAGCGGTTTTGATGACATCCTTGAGTTCTGGATACTACGAAAAATTGAGAACCTTGTACTGGGAGTACCCAACCACAACGGGAGAGGTCATTGCAGTTCACCAGCCAAGCTACGAAATGTATCAGCAGACTGAGAAGAAGGCTCACAACAGGAAAGCATGGGCAGAAATGTACCTTCTGAGTATGAGCGATGTATTGGTGACCAGTGCATGGTCGACGTTCGGGTATGTGGCTCAAGGACTCGGGGGATTGAAGCCATGGATTCTTTACAAGGCGGAGAACATGACCACGCCCGATCCAGCGTGTCGTAGGGCGATGTCAATGGAGCCTTGCTTTCATGCTCCTCCGTTCTATGATTGCAAGGCAAAGAAAGGAATAGATACTGGTGTAGTTGTTCCACATGTAAGACATTGTGAAGACATGAGCTGGGGTCTTAAGGTTGTTAACCATCAGGATTTATAA 1716 44.81 MTRGFRRRNLCSRPIDRLRFQASADGAPKSGFLRDMKVKEIFTYLLIGLPLVVFVGLVFRNPAADLSLGFAEARALERVVTNGSSESSGSENGFSRLSNRDKLIGGLLIPGFDEGSCLSRYQSSLYRRTSTHRPSPYLISKLRDYEALHRRCGPHTKPYDEAVEQLRSGSSVSLTECKYVVWMSYSGLGNKILTLASAFLYAVLTDRVLLVDPGKDMADLFCEPFPEKTWLLPNDFPLMDQFSNFNQKSPNCHGYMLKMNTLNESTEALPSYLYLHLVHDYDDHDKLFFCDQEQALLSRVPWLILKTDNYFVPSLFLIPSFEHELSNLFPQKDNVFHHLGRYLFHPSNHVWGLITRYYEAYLTSADELIGIQVRVFEIGSGPFEHIMDQILSCTLQEKILPDVDKEGFSSVPLERPRVKAVLMTSLSSGYYEKLRTLYWEYPTTTGEVIAVHQPSYEMYQQTEKKAHNRKAWAEMYLLSMSDVLVTSAWSTFGYVAQGLGGLKPWILYKAENMTTPDPACRRAMSMEPCFHAPPFYDCKAKKGIDTGVVVPHVRHCEDMSWGLKVVNHQDL 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8838019 8840531 - Cp4.1LG01g12170.1 Cpe01g01481 462794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01481 571 Gene3D - 354 511 - -
Cpe01g01481 571 PANTHER FUCOSYLTRANSFERASE 2-RELATED 10 570 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cpe01g01481 571 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 10 570 - -
Cpe01g01481 571 Pfam Xyloglucan fucosyltransferase 98 539 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cpe01g01481 571 Gene3D - 174 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01481 Cpe-Chr1:8838019 Cpe20g00012 Cpe-Chr20:76697 0 dispersed
Cpe14g00402 Cpe-Chr14:2483935 Cpe01g01481 Cpe-Chr1:8838019 0 transposed
Cpe01g01481 Cpe-Chr1:8838019 Cpe02g01051 Cpe-Chr2:9679155 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01481 K13681 - csv:101216541 1013.45