Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01485 | ATGAACTCTAAACCTTCTGGAACTTCCGCCGGTTTGCCGGTGCCGGGGAGCTCCGGAGGCAAGGGAAACTCGTCGTCGTCGTCGTCGTCGTCATCGGCATCGGGTACGAGCAAGGAGAAGCAAAAGGAGAAAGCGAGAGTGAGTAGAACGTCACAGATACTATGGCACGCTCACCAAAATGATTCTGCTGCTGTTCGCAAGCTCCTGGAGGAGGATCACTCCCTTGTCCATGCCAGAGATTATGACAACCGCACTCCTCTCCATGTTGCATCGCTTCATGGCTGGATCGTCGTTGCCAAGTGTTTGATTGAACACGGTGCTGATGTTAATGCCCAAGATCGCTGGAAGAACACACCGCTAGCTGATGCAGAAGGAGCTAAAAAGTATGACATAATTGAGTTATTAAAATCGTATGGTGGCCTTTCCTATGGTCAAAATGGAAGCCATTTTGAACCGAAGCCTGTTCTTCCTCCTCTGCCAAATAAATGTGATTGGGAAGTTGATCCTTCTGAACTGGATTTTTCAAACTCAGCTATTATTGGCAAGTTCCTGTACTGGAGTCCATTGGTTTACCAATTTATAATCAAAATCTATTCTGCTAGTTACGGCGTCAAGAAATGCAAGTACAGGTCTGAAGGGTCCTTCGGGGAAATTTTGAAGGCCTATTGGCGTGGAACCCCTGTAGCTGTAAAGCGTATTCTTCCATCACTTTCAGATGATAGACTCGTGATTCAGGACTTTCGACATGAGGTTAATCTGTTGGTGAAGCTACGCCACCCTAACATTGTCCAATTTCTTGGAGCTGTCACTGAGAAGAAACCACTTATGTTAATCACTGAATATTTAAGAGGGGGCGATCTTCACCAGTACCTCAAGGACAAAGGTTCCCTCAGTCCTGCTACGGCCATAAATTTTGCACAGGACATCGCCAGGGGAATGACTTATCTCCACAACGAGCCAAATGTTATAATTCACCGTGACCTAAAACCAAGGAACGTTCTTTTAGTCAGCTCTGGTGTGGAGCATCTAAAAGTTGGCGACTTTGGTCTAAGCAAGCTCATCAAGGTTCAGAATTCACATGATGTTTACAAAATGACAGGCGAGACCGGGAGCTACCGGTATATGGCTCCTGAAGTTTTTAAGCACAGAAAATATGATAAGAAAGTGGACGTGTTTTCTTTTGCGATGATATTATACGAGATGCTGGAGGGAGACCCTCCACTGGCAAATTATGAGCCGTATGAAGCTGCCAAATACGTGGCTGAAGGTCATAGACCGGTGTTCCGTGCGAAAGGATACCTTTCTGTTCTAAGAGAGTTAACTGTAGAATGTTGGGCAGCTGATATGAACAAGAGACCTTCTTTCTTGGAAATTCTCAAAAGACTTGAAAAGATCAAGGAAAGATATACCTACTGA | 1416 | 45.27 | MNSKPSGTSAGLPVPGSSGGKGNSSSSSSSSSASGTSKEKQKEKARVSRTSQILWHAHQNDSAAVRKLLEEDHSLVHARDYDNRTPLHVASLHGWIVVAKCLIEHGADVNAQDRWKNTPLADAEGAKKYDIIELLKSYGGLSYGQNGSHFEPKPVLPPLPNKCDWEVDPSELDFSNSAIIGKFLYWSPLVYQFIIKIYSASYGVKKCKYRSEGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSPATAINFAQDIARGMTYLHNEPNVIIHRDLKPRNVLLVSSGVEHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLANYEPYEAAKYVAEGHRPVFRAKGYLSVLRELTVECWAADMNKRPSFLEILKRLEKIKERYTY | 471 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8860395 | 8866389 | - | Cp4.1LG01g12210.1 | Cpe01g01485 | 462798 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01485 | 471 | Gene3D | Transferase(Phosphotransferase) domain 1 | 284 | 470 | - | - | |
Cpe01g01485 | 471 | PANTHER | SERINE/THREONINE-PROTEIN KINASE STY8-LIKE | 211 | 468 | - | - | |
Cpe01g01485 | 471 | Pfam | Protein tyrosine and serine/threonine kinase | 212 | 462 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe01g01485 | 471 | PIRSF | ILK | 194 | 471 | - | - | |
Cpe01g01485 | 471 | PIRSF | ILK | 11 | 190 | - | - | |
Cpe01g01485 | 471 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 211 | 468 | - | - | |
Cpe01g01485 | 471 | SUPERFAMILY | Protein kinase-like (PK-like) | 200 | 467 | IPR011009 | - | |
Cpe01g01485 | 471 | SMART | ANK_2a | 82 | 111 | IPR002110 | GO:0005515 | |
Cpe01g01485 | 471 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 323 | 335 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe01g01485 | 471 | SUPERFAMILY | Ankyrin repeat | 51 | 140 | IPR036770 | - | |
Cpe01g01485 | 471 | CDD | STKc_MAP3K-like | 212 | 462 | - | - | |
Cpe01g01485 | 471 | Pfam | Ankyrin repeats (3 copies) | 53 | 113 | IPR002110 | GO:0005515 | |
Cpe01g01485 | 471 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cpe01g01485 | 471 | ProSiteProfiles | Ankyrin repeat region circular profile. | 82 | 114 | - | - | |
Cpe01g01485 | 471 | ProSiteProfiles | Ankyrin repeat profile. | 82 | 114 | IPR002110 | GO:0005515 | |
Cpe01g01485 | 471 | Gene3D | Phosphorylase Kinase; domain 1 | 204 | 283 | - | - | |
Cpe01g01485 | 471 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 31 | 182 | - | - | |
Cpe01g01485 | 471 | PRINTS | Tyrosine kinase catalytic domain signature | 433 | 455 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe01g01485 | 471 | PRINTS | Tyrosine kinase catalytic domain signature | 317 | 335 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe01g01485 | 471 | PRINTS | Tyrosine kinase catalytic domain signature | 279 | 292 | IPR001245 | GO:0004672|GO:0006468 | |
Cpe01g01485 | 471 | ProSiteProfiles | Protein kinase domain profile. | 204 | 471 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g01485 | 471 | Gene3D | - | 21 | 148 | IPR036770 | - | |
Cpe01g01485 | 471 | PANTHER | SERINE/THREONINE-PROTEIN KINASE STY8-LIKE | 31 | 182 | - | - | |
Cpe01g01485 | 471 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Cpe01g01485 | 471 | SMART | serkin_6 | 204 | 469 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01485 | Cpe-Chr1:8860395 | Cpe16g00735 | Cpe-Chr16:7431807 | 4.10E-100 | dispersed | |
Cpe01g01485 | Cpe-Chr1:8860395 | Cpe09g00199 | Cpe-Chr9:1144514 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62153 | PF07714 | PK_Tyr_Ser-Thr | 3.00E-61 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01485 | - | - | csv:101215575 | 779.63 |