Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01485 ATGAACTCTAAACCTTCTGGAACTTCCGCCGGTTTGCCGGTGCCGGGGAGCTCCGGAGGCAAGGGAAACTCGTCGTCGTCGTCGTCGTCGTCATCGGCATCGGGTACGAGCAAGGAGAAGCAAAAGGAGAAAGCGAGAGTGAGTAGAACGTCACAGATACTATGGCACGCTCACCAAAATGATTCTGCTGCTGTTCGCAAGCTCCTGGAGGAGGATCACTCCCTTGTCCATGCCAGAGATTATGACAACCGCACTCCTCTCCATGTTGCATCGCTTCATGGCTGGATCGTCGTTGCCAAGTGTTTGATTGAACACGGTGCTGATGTTAATGCCCAAGATCGCTGGAAGAACACACCGCTAGCTGATGCAGAAGGAGCTAAAAAGTATGACATAATTGAGTTATTAAAATCGTATGGTGGCCTTTCCTATGGTCAAAATGGAAGCCATTTTGAACCGAAGCCTGTTCTTCCTCCTCTGCCAAATAAATGTGATTGGGAAGTTGATCCTTCTGAACTGGATTTTTCAAACTCAGCTATTATTGGCAAGTTCCTGTACTGGAGTCCATTGGTTTACCAATTTATAATCAAAATCTATTCTGCTAGTTACGGCGTCAAGAAATGCAAGTACAGGTCTGAAGGGTCCTTCGGGGAAATTTTGAAGGCCTATTGGCGTGGAACCCCTGTAGCTGTAAAGCGTATTCTTCCATCACTTTCAGATGATAGACTCGTGATTCAGGACTTTCGACATGAGGTTAATCTGTTGGTGAAGCTACGCCACCCTAACATTGTCCAATTTCTTGGAGCTGTCACTGAGAAGAAACCACTTATGTTAATCACTGAATATTTAAGAGGGGGCGATCTTCACCAGTACCTCAAGGACAAAGGTTCCCTCAGTCCTGCTACGGCCATAAATTTTGCACAGGACATCGCCAGGGGAATGACTTATCTCCACAACGAGCCAAATGTTATAATTCACCGTGACCTAAAACCAAGGAACGTTCTTTTAGTCAGCTCTGGTGTGGAGCATCTAAAAGTTGGCGACTTTGGTCTAAGCAAGCTCATCAAGGTTCAGAATTCACATGATGTTTACAAAATGACAGGCGAGACCGGGAGCTACCGGTATATGGCTCCTGAAGTTTTTAAGCACAGAAAATATGATAAGAAAGTGGACGTGTTTTCTTTTGCGATGATATTATACGAGATGCTGGAGGGAGACCCTCCACTGGCAAATTATGAGCCGTATGAAGCTGCCAAATACGTGGCTGAAGGTCATAGACCGGTGTTCCGTGCGAAAGGATACCTTTCTGTTCTAAGAGAGTTAACTGTAGAATGTTGGGCAGCTGATATGAACAAGAGACCTTCTTTCTTGGAAATTCTCAAAAGACTTGAAAAGATCAAGGAAAGATATACCTACTGA 1416 45.27 MNSKPSGTSAGLPVPGSSGGKGNSSSSSSSSSASGTSKEKQKEKARVSRTSQILWHAHQNDSAAVRKLLEEDHSLVHARDYDNRTPLHVASLHGWIVVAKCLIEHGADVNAQDRWKNTPLADAEGAKKYDIIELLKSYGGLSYGQNGSHFEPKPVLPPLPNKCDWEVDPSELDFSNSAIIGKFLYWSPLVYQFIIKIYSASYGVKKCKYRSEGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSPATAINFAQDIARGMTYLHNEPNVIIHRDLKPRNVLLVSSGVEHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGDPPLANYEPYEAAKYVAEGHRPVFRAKGYLSVLRELTVECWAADMNKRPSFLEILKRLEKIKERYTY 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8860395 8866389 - Cp4.1LG01g12210.1 Cpe01g01485 462798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01485 471 Gene3D Transferase(Phosphotransferase) domain 1 284 470 - -
Cpe01g01485 471 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 211 468 - -
Cpe01g01485 471 Pfam Protein tyrosine and serine/threonine kinase 212 462 IPR001245 GO:0004672|GO:0006468
Cpe01g01485 471 PIRSF ILK 194 471 - -
Cpe01g01485 471 PIRSF ILK 11 190 - -
Cpe01g01485 471 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 211 468 - -
Cpe01g01485 471 SUPERFAMILY Protein kinase-like (PK-like) 200 467 IPR011009 -
Cpe01g01485 471 SMART ANK_2a 82 111 IPR002110 GO:0005515
Cpe01g01485 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Cpe01g01485 471 SUPERFAMILY Ankyrin repeat 51 140 IPR036770 -
Cpe01g01485 471 CDD STKc_MAP3K-like 212 462 - -
Cpe01g01485 471 Pfam Ankyrin repeats (3 copies) 53 113 IPR002110 GO:0005515
Cpe01g01485 471 MobiDBLite consensus disorder prediction 1 36 - -
Cpe01g01485 471 ProSiteProfiles Ankyrin repeat region circular profile. 82 114 - -
Cpe01g01485 471 ProSiteProfiles Ankyrin repeat profile. 82 114 IPR002110 GO:0005515
Cpe01g01485 471 Gene3D Phosphorylase Kinase; domain 1 204 283 - -
Cpe01g01485 471 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 31 182 - -
Cpe01g01485 471 PRINTS Tyrosine kinase catalytic domain signature 433 455 IPR001245 GO:0004672|GO:0006468
Cpe01g01485 471 PRINTS Tyrosine kinase catalytic domain signature 317 335 IPR001245 GO:0004672|GO:0006468
Cpe01g01485 471 PRINTS Tyrosine kinase catalytic domain signature 279 292 IPR001245 GO:0004672|GO:0006468
Cpe01g01485 471 ProSiteProfiles Protein kinase domain profile. 204 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01485 471 Gene3D - 21 148 IPR036770 -
Cpe01g01485 471 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 31 182 - -
Cpe01g01485 471 MobiDBLite consensus disorder prediction 1 54 - -
Cpe01g01485 471 SMART serkin_6 204 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01485 Cpe-Chr1:8860395 Cpe16g00735 Cpe-Chr16:7431807 4.10E-100 dispersed
Cpe01g01485 Cpe-Chr1:8860395 Cpe09g00199 Cpe-Chr9:1144514 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62153 PF07714 PK_Tyr_Ser-Thr 3.00E-61 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01485 - - csv:101215575 779.63