Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01496 TTCTACACAACAATGGCGTCTAAAGCTTTCCTCTTCGCTCTCATCTCCTTCATTTCATTCTCCTCTTCTATCTTAGCAGATTTTGTTAAAGTTTCAGTGAAAGGAGTGACCACCATTGCTGAAACCGACAATGATTTCATCTGTGCTACTCTGGATTGGTGGCCTTCTGATAAATGCGATTACGGCCAATGCCCATGGGGAAAAGCTGGCCTTCTCAATTTGGATCTGCAGAACATTATCTTGTCTAAAGCAATCAAGGAGTTCAATCCTCTGAGAATCAGAGTTGGAGGGTCACTACAAGATCAAATCATTTATAAAGTTGGGACCTCAGTGAAAAAGTGCCCTCAGATGAAGAAACAAGACAATGGTTTGTTCGGATTCAGCAAAGGTTGTTTCCACATGGAAAGATGGGATGAACTTAGCGACATGTTCAACAAAACCTCATCCACGGATCTGTTAGACTATTCAAGATGGCGCATTAACATTTTGGTTGGCTGGAAACAGCGCACTTCTATGGCACAGACTAATGGGAACGAAGGTCCTGTCGGCGTCCCACGACAGCTCTCCATATCTTCGTGTCTATTCTCACTGCACCAAGAACAACGACGGCGTGACAGTGCTTCTAATCAACATGTCGAACTCGACGAGCTATGA 654 44.04 FYTTMASKAFLFALISFISFSSSILADFVKVSVKGVTTIAETDNDFICATLDWWPSDKCDYGQCPWGKAGLLNLDLQNIILSKAIKEFNPLRIRVGGSLQDQIIYKVGTSVKKCPQMKKQDNGLFGFSKGCFHMERWDELSDMFNKTSSTDLLDYSRWRINILVGWKQRTSMAQTNGNEGPVGVPRQLSISSCLFSLHQEQRRRDSASNQHVELDEL 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8929471 8933150 - Cp4.1LG01g12260.1 Cpe01g01496 462809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01496 217 SUPERFAMILY (Trans)glycosidases 42 147 IPR017853 -
Cpe01g01496 217 Pfam Glycosyl hydrolase family 79, N-terminal domain 29 150 IPR005199 GO:0016020|GO:0016798
Cpe01g01496 217 Gene3D Glycosidases 69 159 - -
Cpe01g01496 217 PANTHER OS07G0598400 PROTEIN 23 150 - -
Cpe01g01496 217 PANTHER HEPARANASE-RELATED 23 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01496 Cpe-Chr1:8929471 Cpe07g01124 Cpe-Chr7:9886766 5.15E-33 dispersed
Cpe01g01496 Cpe-Chr1:8929471 Cpe02g01039 Cpe-Chr2:9604228 3.23E-47 wgd
Cpe01g01496 Cpe-Chr1:8929471 Cpe04g01475 Cpe-Chr4:11720645 3.06E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01496 K07964 - csv:101214214 225.713