Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01502 ATGTCGTCCGCCGAGAAGGAAAGAGAAACGCAGGTCTACATGGCCAAGCTTTCTGAACAGGCTGAACGCTACGACGAAATGGTGGAGTGTATGAAACAAGTTGCTAAACTAGATGTTGAGCTAACCATGGAAGAGAGAAACTTGCTTTCTGTTGGATACAAAAATGTTATAGGTGCTCGGCGAGCTTCTTGGCGCATCATGTCCTCAATTGAACAGAAGGAGGAGTCCAAAAGCAATGAGAATAATGTTAAACTTATTAAAGGTTACCGTCAGAAGGTGGAGGAGGAGCTTTCCAAGATCTGCACCGATATTCTGACTATTATTGACAACCATCTCATTCCTTCTTCAACTTCTTCAGAAGCATCGGTCTTTTATTACAAGATGAAAGGTGATTATTACCGATATCTTGCTGAATTCAAAACAGATCAAGAAAGGAAGGAGGCAGCTGACCAGTCATTGAAAGGATACGAGACTGCATCAAGCACCGCAAATACTGAACTCCCATCAACCCACCCAATCCGTCTTGGGCTTGCTCTCAACTTTTCTGTCTTCTACTATGAGATTATGAACTCCCCTGAAAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGACAACCTTACTCTCTGGACATCTGATTTACCAGAAGATGGAGCAGCAGTAATGGAGAATGAAATAGCCCTCACGCAACGACTGGATTGGACATCCATCACCTTTACTCACTACGGAGTATGGACCCGTACAATGGTGGCTTGTGCTGATATTAGCTACTTTTTGGTTCCAACCAAAAACCAGAAAGATTAA 879 43.46 MSSAEKERETQVYMAKLSEQAERYDEMVECMKQVAKLDVELTMEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKGYRQKVEEELSKICTDILTIIDNHLIPSSTSSEASVFYYKMKGDYYRYLAEFKTDQERKEAADQSLKGYETASSTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGAAVMENEIALTQRLDWTSITFTHYGVWTRTMVACADISYFLVPTKNQKD 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8963226 8965985 + Cp4.1LG01g12070.1 Cpe01g01502 462815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01502 292 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cpe01g01502 292 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cpe01g01502 292 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cpe01g01502 292 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cpe01g01502 292 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Cpe01g01502 292 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cpe01g01502 292 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Cpe01g01502 292 Gene3D - 1 248 IPR036815 -
Cpe01g01502 292 Coils Coil 196 216 - -
Cpe01g01502 292 SMART 1433_4 8 249 IPR023410 -
Cpe01g01502 292 PANTHER BNAC03G57490D PROTEIN 4 244 - -
Cpe01g01502 292 PANTHER 14-3-3 PROTEIN 4 244 IPR000308 -
Cpe01g01502 292 Coils Coil 14 34 - -
Cpe01g01502 292 PIRSF 14-3-3 2 248 IPR000308 -
Cpe01g01502 292 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cpe01g01502 292 Pfam 14-3-3 protein 14 236 IPR023410 -
Cpe01g01502 292 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01502 Cpe-Chr1:8963226 Cpe04g00787 Cpe-Chr4:7486248 3.82E-147 dispersed
Cpe01g01502 Cpe-Chr1:8963226 Cpe07g00087 Cpe-Chr7:421056 3.24E-168 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01502 - K06630 csv:101221275 446.047