Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01504 ATGGCTATGCCAACTATTGCTTGTGTAGAGATGGGTCAGCAAGTCCTTCAAAAGGCAATAGACTATGCTTGTGGAGCTGGAGCTGACTGTTCTCCAATCCTCACCAATGGCGCTTGTTTTCAGCCCAACACCGTCAAAGATCACTGCAACTACGCCGTCAACAGCTATTTCCAGCGGAAGGGACAAGTCCAAGGAAGCTGCGACTTCGGCGGCGCCGCCACGCCCAGCGTTACCCTCACCGCCACCGTGCCCTCTGGTTGCGTCTATCCTTCTAGCCCCAGCAATGCGGGAACAACACCGACGAGCCCCAGTGGAACTACGCCGACGATGACTCCACCAGGGATGCCGACGATGACTCCACCTGGGACGCCGTCGTCGACGAGTCCAGGAATGACGCCGTCGGTGTTCAACAACGGAATCAGCCCGAGTGGTAGCGGCGGGTTCAACGATGGCAGCGGCAGCGGCGGCGTGGGTTTCAGTGATAATAGGAACTCGTTTTTGGCTGTGGGCTCAACTCTGTGGTTAGCCGTAGTGTTTCTCTGGGGATGA 549 57.19 MAMPTIACVEMGQQVLQKAIDYACGAGADCSPILTNGACFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFGGAATPSVTLTATVPSGCVYPSSPSNAGTTPTSPSGTTPTMTPPGMPTMTPPGTPSSTSPGMTPSVFNNGISPSGSGGFNDGSGSGGVGFSDNRNSFLAVGSTLWLAVVFLWG 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8973367 8976814 + Cp4.1LG01g12090.1 Cpe01g01504 462817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01504 182 Coils Coil 181 182 - -
Cpe01g01504 182 MobiDBLite consensus disorder prediction 106 127 - -
Cpe01g01504 182 Gene3D - 2 91 - -
Cpe01g01504 182 PANTHER BETA-1,3 GLUCANASE 11 173 IPR044788 -
Cpe01g01504 182 SMART X8_cls 6 89 IPR012946 -
Cpe01g01504 182 MobiDBLite consensus disorder prediction 128 149 - -
Cpe01g01504 182 MobiDBLite consensus disorder prediction 92 149 - -
Cpe01g01504 182 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 11 173 - -
Cpe01g01504 182 Pfam X8 domain 13 74 IPR012946 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01504 Cpe07g00085 CCT
Cpe01g01504 Cpe07g00085 ECH
Cpe01g01504 Cpe09g00219 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01504 Cpe-Chr1:8973367 Cpe07g00085 Cpe-Chr7:413020 1.35E-48 dispersed
Cpe01g01504 Cpe-Chr1:8973367 Cpe04g01466 Cpe-Chr4:11667711 1.78E-33 wgd
Cpe01g01504 Cpe-Chr1:8973367 Cpe09g00219 Cpe-Chr9:1257760 1.01E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01504 - - cmax:111482519 224.557