Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01507 ATGGGGGAAGCCAACGAAGGAGGAAGTAGAGGAATGGAGAAGGTTCCTCTGCAAACTGAGAAGTACCCAACAGATCTGTTGCAGAGATTTTTGTGTAGAAATTCACATCAGCCCCAAATTGGGGCGTTTAATGAAGAGGGTGATGCAGAGGAGATTGAGCTGAATCTTGGGCTTTCACTTGGGGGTCGATTTGGGGTTGACAAGAATTCCAAGATGCTTGTTCGGTCGTCGTCTATTGCTGGGACGATGCGTTTGAGGGACGACGAGGCATCGACTCCGATGGCGGTATCGTACCCGGGTCTTATTCGGACGTCGTCTCTTCCACCGGAGACGGAAGAGGAGTGGAGGAAGAGGAAGGAATTGCAGACGTTGAGGCGAATGGAGGCGAAGAGGAGGAGGTTTGAGAAGCAGAGGAATAAGGATGGAATTGGGATGGGGAGTGGTGGGTGTTTTGATGAAGAGAGGCGTGAAATTGGAGGCCTTGCTGGATTGAATTTGAGAGAGAAAAGGGCTGGTTCGGGTGTTTTGACAACAGTGGCGCCGCCGTTCGGGTCGACAACGTGGGCGGCGGGTGCTCGACAGGCTGTTATCGGCGGAATTGTGGATGAAGTTGTCAAAGGGAAAGGTGGTTGTACATCGGGCGGTGGTGGCGGCGGCAGCAGAGGTTTACCGGGGCTCGGACAGCCTGGTTCTCAGTGCTCCGCCGAATCACAGGGCGGAAGCTCATCGGGGATGTCGGAATTGGACAGCAAACACATCCAAGGATCAAGCAGTTACAGCGAAGCAAGAAGCTCCTCGCAAGAGCAAGGCAACCAAGAGGCTGGAGGTTCTTCAGGATCGAAGACGTGTGAGAATCCATCGGGCAGTTCCAAAGCAGAGACGAAAAATCCATCAAAGAAGCCCGATTTGGGCGAGAACAGGGGGAGAGAAACGGGGACGTCGTCGATGGAAGACATGCCTTGTGTGTTCACAATAGGGGATGGGCCTGATGGGAGAAGGGTGGAAGGGATTCTTTACAAGTATGGGAAAGGGGAGGAAGTGAGGATAATGTGTGTATGCCATGGGAAGTTTCTGTCGCCAGCAGAGTTTGTGAAGCATGCTGGTGGGAAAAATGTGGCTCACCCACTAAGACATATAGTTGTCAATCCCAATTCTGGTTCTTTTTCGTGA 1170 52.39 MGEANEGGSRGMEKVPLQTEKYPTDLLQRFLCRNSHQPQIGAFNEEGDAEEIELNLGLSLGGRFGVDKNSKMLVRSSSIAGTMRLRDDEASTPMAVSYPGLIRTSSLPPETEEEWRKRKELQTLRRMEAKRRRFEKQRNKDGIGMGSGGCFDEERREIGGLAGLNLREKRAGSGVLTTVAPPFGSTTWAAGARQAVIGGIVDEVVKGKGGCTSGGGGGGSRGLPGLGQPGSQCSAESQGGSSSGMSELDSKHIQGSSSYSEARSSSQEQGNQEAGGSSGSKTCENPSGSSKAETKNPSKKPDLGENRGRETGTSSMEDMPCVFTIGDGPDGRRVEGILYKYGKGEEVRIMCVCHGKFLSPAEFVKHAGGKNVAHPLRHIVVNPNSGSFS 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8992939 8996236 - Cp4.1LG01g12030.1 Cpe01g01507 462820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01507 389 Pfam Tify domain binding domain 347 381 IPR032308 -
Cpe01g01507 389 Pfam Ethylene-responsive binding factor-associated repression 48 81 IPR012463 -
Cpe01g01507 389 PANTHER AFP HOMOLOG 2 19 385 IPR031307 GO:0007165
Cpe01g01507 389 MobiDBLite consensus disorder prediction 230 294 - -
Cpe01g01507 389 MobiDBLite consensus disorder prediction 132 151 - -
Cpe01g01507 389 PANTHER NINJA-FAMILY PROTEIN AFP1 19 385 - -
Cpe01g01507 389 Pfam Putative nuclear localisation signal 101 215 IPR032310 -
Cpe01g01507 389 Coils Coil 117 137 - -
Cpe01g01507 389 MobiDBLite consensus disorder prediction 212 320 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01507 Cpe09g00223 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01507 Cpe-Chr1:8992939 Cpe15g00147 Cpe-Chr15:1222340 1.86E-17 dispersed
Cpe01g01507 Cpe-Chr1:8992939 Cpe20g00076 Cpe-Chr20:405994 5.92E-07 wgd
Cpe01g01507 Cpe-Chr1:8992939 Cpe09g00223 Cpe-Chr9:1279208 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01507 - - csv:101220339 603.594