Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01514 ATGAGCAGCTCCCAAGACAAATCTTCCATGGATTTGGTTCAACCAAATGACCATCTTTGTTATGTCAAATGCAACTTTTGCAACACTCTTCTCGCGGTTGGGATACCATGCAGACGTTTGTTGGAGACAGTGACAGTGAAATGTGGTAATTGTAGTAATCTGTCGTTTTTGAGCACAAGACCACCTTTACAAGGCCAATGCATTGATCATCATCCTCTCACTTTTCAGCCTCAGGTTGGCTTCTCTAATGATACTCAAAAGGGTGCATCGATATCGTCTACATCGTCGTCGTCTTCAATGCCAAATGAACCTCCCTCTCCAAATTTTGTTGTCAAACGAGATTCAACGCATCAAAGCTGCCAACCCAGAAATCCCACATCGAGAAGCATTCAGTGCCGCAGCAAAAAACTGGGCAAGGTACATTCCAAATTCCGCAGCTGGGTCGGTTTCTGGGACTCCCAACGACGAATGATACGGTTTAGAGCACTGGAAGAATCGGACATATCAAATGGCTGTCTGCTCTAG 525 45.14 MSSSQDKSSMDLVQPNDHLCYVKCNFCNTLLAVGIPCRRLLETVTVKCGNCSNLSFLSTRPPLQGQCIDHHPLTFQPQVGFSNDTQKGASISSTSSSSSMPNEPPSPNFVVKRDSTHQSCQPRNPTSRSIQCRSKKLGKVHSKFRSWVGFWDSQRRMIRFRALEESDISNGCLL 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9051093 9053781 + Cp4.1LG01g15160.1 Cpe01g01514 462827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01514 174 MobiDBLite consensus disorder prediction 85 132 - -
Cpe01g01514 174 Pfam YABBY protein 15 107 IPR006780 GO:0007275
Cpe01g01514 174 PANTHER PROTEIN CRABS CLAW 8 113 - -
Cpe01g01514 174 PANTHER PROTEIN YABBY 6-RELATED 8 113 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01514 Cpe09g00228 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01514 Cpe-Chr1:9051093 Cpe08g00754 Cpe-Chr8:6069752 1.27E-12 dispersed
Cpe01g01514 Cpe-Chr1:9051093 Cpe09g00228 Cpe-Chr9:1313947 3.56E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48869 PF04690 YABBY 5.00E-20 CL0114 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01514 K25796 - cmos:111458487 207.994