Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01546 ATGGAAGAAATGTACGGCTTGCAGTCCACGGCGGAGTATTCGGATAAGGCGTTGATGTCGCCGGAGAATCTGATTTTTCCGCCGGATTATCAGAGCCTTTTAGTGAGCTCCGGAGCGTTTCGTGATCGGATTCCAGTGTTTGGATCCAACGATTTGCTTTCGGCGGCGGCGTCCGCGATTTCGGAAGCTGAAGCAGTATCGATCACGCCGGAAATTCAAGGTGAAGAAGATATGGTGAACGTGATCAAAGCGAAAATTTCTTCTCATCCTACTTATCCTCGTTTGCTCGACGCCTATATTGACTGCCAAAAGGTAGGGGCGCCTCCAGAGATTGCACATTTGTTAGAGGGAATCCGTCAAGAAACCGACCTTTGTAACCGTCACGCTGTCACCACGTGCTTAGGCGCAGATCCTGAGCTCGATGAATTCATGGAAACGTACTGCGATATGTTGGTGAAGTATAAATCAGATCTCAAAAGGCCTTTCGACGAAGCAACTACATTCTTGAACAAGATCGAACTGCAACTTAGTAGCCTCTGCACTGGCGCCTTCTCCAGAAGCCATTCCGGTCTGTATTGTTTAATTTCTCATTCTCTTTGA 600 47.83 MEEMYGLQSTAEYSDKALMSPENLIFPPDYQSLLVSSGAFRDRIPVFGSNDLLSAAASAISEAEAVSITPEIQGEEDMVNVIKAKISSHPTYPRLLDAYIDCQKVGAPPEIAHLLEGIRQETDLCNRHAVTTCLGADPELDEFMETYCDMLVKYKSDLKRPFDEATTFLNKIELQLSSLCTGAFSRSHSGLYCLISHSL 199
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 9228197 9230224 + Cp4.1LG01g15490.1 Cpe01g01546 462859
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01546 199 Pfam KNOX2 domain 134 180 IPR005541 GO:0003677|GO:0005634
Cpe01g01546 199 Pfam KNOX1 domain 82 122 IPR005540 GO:0003677|GO:0005634
Cpe01g01546 199 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 1 186 - -
Cpe01g01546 199 SMART KNOX1_2 80 124 IPR005540 GO:0003677|GO:0005634
Cpe01g01546 199 SMART KNOX2_2 130 181 IPR005541 GO:0003677|GO:0005634
Cpe01g01546 199 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 186 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe01g01546 Cpe09g00513 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01546 Cpe-Chr1:9228197 Cpe04g01564 Cpe-Chr4:12250525 9.50E-48 dispersed
Cpe01g01546 Cpe-Chr1:9228197 Cpe11g00023 Cpe-Chr11:125984 5.72E-76 wgd
Cpe01g01546 Cpe-Chr1:9228197 Cpe09g00513 Cpe-Chr9:3419266 4.06E-127 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01546 - - csv:101211876 343.584