Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01549 ATGGCGGTTCAAGGCGGAGCACCGGCGGCTCAGCCCAGGAAGTTCTCTCTTCCGGTGGACTCCGAACACAAATCCACCAAATTCAATATATTCTCCGTCGCAGCTCCTCACATGCGAACGTTTCACCTGTCGTGGATTTCGTTCTGCGCTTGTTTCGTTTCAAGTTTTGCGGCAGCTCCTCTGCTTCCGGTGATCCGCGACAATCTTAATTTAACCGACACTGACATTGGGAACGCCGGAATTGCCTCCGTCTCCGGCGCTGTCTTTGCCCGTATCATGATGGGTTCCGCCTGTGATTTAGTCGGACCACGTCTCGCCTCTGCCTCACTCATCCTCATAACCTCGCCGGCTGTTTATTTAACCTCCATAGCCTCATCCCCTGCTTCGTTTTTTCTCGTTCGATTCTTCACTGGATTCTCTCTCGCCACATTCGTCTCGACCCAATTCTGGATGAGCTCAATGTTCTCCTCCACCGTCGTCGGCACCGCCAATGGCGTAGCCGGCGGTTGGGGGAACTTAGGCGGCGGCGCAACACAGCTGATTATGCCGTACGTGTTCGCCATCATCGAGCACATCGGCGCAACGAAATTCACTGCGTGGAGAATCGCTTTCTTCATCCCAGCGATTTTCCAAACGCTTTCGGCCTTTGCGGTTCTGATGCTCGGCGAGGACACGCCGGACGGGAACTTCGGGGAGCTGCAGAAAACAGGGGAGAAGGCAAAAGACAAATTTTCAACGGTGGTGTACAATGGGGCGAAGAATTACAGGGGATGGATTTTGGCATTGACTTATGGGTACTGTTTTGGGGTGGAATTAACGATTGACAATATAATAGCGAATTATTTCTACGATAGATTCAATTTGAACCTGCACACGGCAGGGATCATAGCGGCGAGCTTTGGGCTGGCTAACCTTTTTTCGAGGCCGTACGGAGGGATACTGTCGGACGTGGTGGCGAAGAGGTACGGCATGAGGGGTAGGCTGTGGGCTCTGTGGTTGGTGCAGACATTGGGCGGTGTTTTCTGTGTGATTCTTGGATTGGTTCAGTCTTTGAGTGTTTCCATTGCCATTATGATTATTTTCTCTCTCTTTGTTCAAGCTGCGTGTGGACTTACATTTGGCGTCGTTCCTTTCATCTCCAGAAGCATGCTGACCGGACCAGCTTCCTCCAAGATAGCTTCCGAGGAAGAGTATTACTTGTCGGAGTGGACCCCTGAGGAGAAGGCCAAAGGCTACCATTTGGCTGCCCTCAAGTTTGCTGATAACAGCCGAACTGAAAGAGGCAAAAGCCTTAGTAAGGGCACTGCTGATGCTGCCTCTGCCGCGGCTTCACCTCACGTCTGA 1344 52.16 MAVQGGAPAAQPRKFSLPVDSEHKSTKFNIFSVAAPHMRTFHLSWISFCACFVSSFAAAPLLPVIRDNLNLTDTDIGNAGIASVSGAVFARIMMGSACDLVGPRLASASLILITSPAVYLTSIASSPASFFLVRFFTGFSLATFVSTQFWMSSMFSSTVVGTANGVAGGWGNLGGGATQLIMPYVFAIIEHIGATKFTAWRIAFFIPAIFQTLSAFAVLMLGEDTPDGNFGELQKTGEKAKDKFSTVVYNGAKNYRGWILALTYGYCFGVELTIDNIIANYFYDRFNLNLHTAGIIAASFGLANLFSRPYGGILSDVVAKRYGMRGRLWALWLVQTLGGVFCVILGLVQSLSVSIAIMIIFSLFVQAACGLTFGVVPFISRSMLTGPASSKIASEEEYYLSEWTPEEKAKGYHLAALKFADNSRTERGKSLSKGTADAASAAASPHV 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9243081 9245483 - Cp4.1LG01g15620.1 Cpe01g01549 462862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01549 447 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 383 431 - -
Cpe01g01549 447 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 9 384 - -
Cpe01g01549 447 MobiDBLite consensus disorder prediction 423 447 - -
Cpe01g01549 447 SUPERFAMILY MFS general substrate transporter 35 388 IPR036259 -
Cpe01g01549 447 Gene3D MFS general substrate transporter like domains 34 229 IPR036259 -
Cpe01g01549 447 Pfam Major Facilitator Superfamily 45 373 IPR011701 GO:0022857|GO:0055085
Cpe01g01549 447 Gene3D MFS general substrate transporter like domains 240 400 IPR036259 -
Cpe01g01549 447 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 383 431 IPR044772 GO:0015112
Cpe01g01549 447 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 9 384 IPR044772 GO:0015112
Cpe01g01549 447 CDD MFS_NRT2_like 41 382 IPR044772 GO:0015112
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01549 Cpe-Chr1:9243081 Cpe20g00750 Cpe-Chr20:6518091 8.04E-179 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01549 K02575 - csv:101212365 675.241