Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01609 ATGATGGAGAAGAATCTGCTGTTTCTTGTCCTCGATTTGGTTTTGTTTTTTCAATTTCAGGTCTCGTTTAGGGTGTTTTCCCTCTCGCCGGACGGTCTCTCGCTTCTTTCTCTCAAGTCGGCGGTCGACCAGTCGCCTGATTCCTCTGTTTTCTCCGATTGGAACGAGGATGACTCTACGCCTTGCCGATGGTCTGGCATTTCTTGTATGAATGTTTCTGGCGACTCGCGTGTCGTTGGGATTGCTCTCTCTGGTAAGAATCTCCATGGCTATATTCCTTCTGAGCTTGGGTCGCTTGTCTATCTCCGGCGATTGAACCTCCATAACAATAATTTCTACGGCTCCATACCTGAGCAGTTGTTTAATGCTACCTCATTGCATAGCTTATTTCTCTATAGCAATAATCTATCTGGTTCTTTTCCCCCTTCGATCTGCAACATTCCGAGGCTTCAGAACCTCGATCTCTCCAATAATTCTCTCGCCGGACCAATTCCCGACGAATTGAAGAATTGTAAACAGTTGCAGCATTTAATACTCGCCAGAAATCAATTTGACGGAGAAATCCCGTCTGGTATGTGGTCAAGGATGGATAATTTACTTCAACTCGATCTCTCATCCAACGATTTCAGTGGATCGATTCCGGAGGATTTGGGGGAACTGAAGACACTTACCGGTACGCTGAACCTGTCCTTCAATCATTTATCGGGTAAAATTCCGAAGACTCTCGGAGATTTGCCGGTGACGGTGAGTTTCGACCTTCGGAGCAACAATCTGAGCGGAAGCATACCTCAGACGGGTTCCTTCGCGAATCAGGGACCGACTGCATTTCTCAATAACCCCGACTTGTGCGGATTTCCTCTTCAGAAATCTTGTGGGAATTCAGAACGTGGCTCACCGGGTAATACGGATTCTAAGCCATCTTACATTGCTCCTAGAAAAGGATTGAGCGCCGGACTAATCATTCTCATCTCGGCCGCCGACGCGGCCGGAGTAGCGTTTATCGGCCTGATAATAGTGTACATATATTGGCGAAGGAAGGACGATTCGAACGGCTGTAGCTGTACGGCCAAAAGAAAATTCGGTGGGAACCAGAAAGATTTCTGCGGTTTTCCTTGTATGAATGGACAAGATAAGAATGAGGAGTCCGAAATGGAGGAACCGGAGAACAGTGACAGAAGCAAAGAAGAAGGAGGGCTTGTGGCCATAGACAAAGGCTTTACGTTCGAGCTCGACGAGCTACTGAGAGCATCAGCCTATGTGCTGGGAAAGAGTGGACTAGGGATTGTGTACAAAGTGGTCCTTGGAAATGGGATTCCGGTGGCCGTACGGCGGGTGGGCGAAGGCGGAGAACAGAGGTATAAAGAGTTCGTGGCGGAGGTGCAGGCCATTGGAAGGGTAAAGCATCCCAATATCGTGAAACTGAGAGCTTATTATTGGGCGCCGGATGAGAAGCTTTTGATCAGTGATTTTATCTCCAATGGAAACTTGGCCTCTGCACTTCGCGGGAGAAACGGGCAGCCATCTTCAGTGCTTTCATGGTCAACGAGACTGAGAATTGCCAAGGGAACCGCAAGGGGGTTGGCTTATCTACACGAATGCAGTCCAAGAAAATTCGTCCATGGCGACATCAAGCCCTCCAACATTCTCCTCGACAACGATTTCCAGCCCCACATCTCTGACTTCGGCCTCAACCGTTTAATCAGCATCACCGGCAACAACCCCTCCTCCTCCGGCGGCCTAATTGGCGGCGCCTTCTCATACCTCAAGTCCGTCCAAACCGAACGCACCAACAACTACTGCGCGCCGGAGGCCCGTGCCCCTGGCGGTCGTCCCACCCAAAAATGGGACGTCTATTCCTTCGGAGTCATGGTCCTCGAATTGCTCACCGGAAAGTCACCGGAGCTTTCTCCCAACACGTCGACTTCTTTGGAGATTCCAGATTTGGTGAGATGGGTCAGAAAAGGATTTGAAGAAGCAATGCCATTGTCGGATTTGGTTGACCCTGCTCTGCTACAAGAAGTACATGCCAAGAAAGAGGTCCTCGCCGTATTCCACGTGGCGCTCGCTTGTACAGAGAGCGACCCGGAACTCCGGCCCAGAATGAAAACAGTGTCAGAGAGTTTCGACAGGATGGGATCGTAA 2142 49.81 MMEKNLLFLVLDLVLFFQFQVSFRVFSLSPDGLSLLSLKSAVDQSPDSSVFSDWNEDDSTPCRWSGISCMNVSGDSRVVGIALSGKNLHGYIPSELGSLVYLRRLNLHNNNFYGSIPEQLFNATSLHSLFLYSNNLSGSFPPSICNIPRLQNLDLSNNSLAGPIPDELKNCKQLQHLILARNQFDGEIPSGMWSRMDNLLQLDLSSNDFSGSIPEDLGELKTLTGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPDLCGFPLQKSCGNSERGSPGNTDSKPSYIAPRKGLSAGLIILISAADAAGVAFIGLIIVYIYWRRKDDSNGCSCTAKRKFGGNQKDFCGFPCMNGQDKNEESEMEEPENSDRSKEEGGLVAIDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRVGEGGEQRYKEFVAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGRNGQPSSVLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFQPHISDFGLNRLISITGNNPSSSGGLIGGAFSYLKSVQTERTNNYCAPEARAPGGRPTQKWDVYSFGVMVLELLTGKSPELSPNTSTSLEIPDLVRWVRKGFEEAMPLSDLVDPALLQEVHAKKEVLAVFHVALACTESDPELRPRMKTVSESFDRMGS 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9834323 9838364 + Cp4.1LG01g15960.1 Cpe01g01609 462922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01609 713 Gene3D Phosphorylase Kinase; domain 1 406 490 - -
Cpe01g01609 713 SUPERFAMILY Protein kinase-like (PK-like) 420 705 IPR011009 -
Cpe01g01609 713 Pfam Protein kinase domain 420 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01609 713 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Cpe01g01609 713 Gene3D Transferase(Phosphotransferase) domain 1 491 713 - -
Cpe01g01609 713 Gene3D Ribonuclease Inhibitor 195 289 IPR032675 -
Cpe01g01609 713 ProSiteProfiles Protein kinase domain profile. 415 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01609 713 Gene3D Ribonuclease Inhibitor 30 192 IPR032675 -
Cpe01g01609 713 CDD STKc_IRAK 421 711 - -
Cpe01g01609 713 SUPERFAMILY L domain-like 33 288 - -
Cpe01g01609 713 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 8 712 - -
Cpe01g01609 713 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Cpe01g01609 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Cpe01g01609 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 712 - -
Cpe01g01609 713 SMART serkin_6 419 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01609 Cpe09g00581 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01609 Cpe-Chr1:9834323 Cpe09g00320 Cpe-Chr9:1913703 0 dispersed
Cpe01g01609 Cpe-Chr1:9834323 Cpe09g00581 Cpe-Chr9:4019405 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62157 PF00069 Pkinase 4.70E-33 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01609 - - csv:101220493 1311.59