Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01617 CTAAACGGAGCGTTAAGTGATTTGACCGGAAATGGCCTCCGCTTTTCCCAGAAGAATGGATGCCCCAAGGTTTCTAATTTCCTAACCGGCAAGAGGCTCAGGCTGAGAAAGTACACTGCTGCGGCTGTTGCTCCTCGATCAGCTCCGGTGTGCGCCGCCGCCGACCCCGACAGACCCCTCTGCCTGAGATGGAACCAGCAAGCAGAGCTGGTGCACTGCCGGTGGGCAATGTTGGGCGCCGCCGGGATTTTCATCCCGGAATTCTTGACAAAGATCGGAATTCTCAACACCCCGTCGTGGTACACTGCCGGAGAATTGGAATACTTCACCGATACCACCACTCTGTTCATTGTGGAACTCATTTTCATCGGTTGGGCCGAGGGTAGACGATGGGCCGACATTCTGAAACCCGGTTGCGTCAATACTGACCCAATCTTCCCCAACAACAAGCTAACCGGAACCGACGTCGGGTACCCAGGTGGCCTATGGTTCGACCCACTCGGTTGGGGTAGCGGGTCACCCGAAAAAATCAAGGAATTGAGAACGAAAGAGATCAAGAACGGGCGACTGGCTATGTTGGCGGTGATGGGCGCGTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTCTTCGCTCACCTTGCCGATCCCGGCCACGCCACTGTCTTCGCCGTGAGTTTT 690 55.8 LNGALSDLTGNGLRFSQKNGCPKVSNFLTGKRLRLRKYTAAAVAPRSAPVCAAADPDRPLCLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSF 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9892903 9893985 + Cp4.1LG01g16270.1 Cpe01g01617 462930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01617 230 Pfam Chlorophyll A-B binding protein 61 202 IPR022796 -
Cpe01g01617 230 SUPERFAMILY Chlorophyll a-b binding protein 61 227 - -
Cpe01g01617 230 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 51 228 IPR001344 GO:0009765|GO:0016020
Cpe01g01617 230 Gene3D Chlorophyll a/b binding protein domain 38 222 - -
Cpe01g01617 230 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 51 228 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01617 Cpe09g00591 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01617 Cpe-Chr1:9892903 Cpe04g01009 Cpe-Chr4:9034391 6.10E-71 dispersed
Cpe01g01617 Cpe-Chr1:9892903 Cpe09g00591 Cpe-Chr9:4104797 6.41E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01617 K08908 - csv:101214055 407.142