Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01634 | ATGGAGACTCACTTTAATCACAATCTATTCGACAGGCGACCCATTCGGAAGAACACGAATTCTTCTGTCAAATGGATCAAAGAATGGGTCCCCCAAGATGTTGTTGCAACTGGAGGAAAGTGCTTTCTTTTCAAATGGGTTACAGAGGATACATTGAAGGCACTACAGGAGAAGTCAAAACAGTCGGAAGCACCAGAACCTGAACCTGAACCCACCACTGAAGTGCTTTTCCTTTGTAGCTATGAGGGCTGTGGAAAAACATTTATTGATGCAGGTGCTTTGAGGAAGCATTCTCACATTCATGGGGAGAGGCAATATGTTTGTCACTACGATGGCTGTGGAAAGAAATTTTTGGATAGCTCGAAGTTGAAAAGACACTTCCTTATTCATACTGGTGAAAGAGATTTTGTGTGTCCTCATGAAGGCTGTGGTAAGGCATTTTCCCTGGATTTCAACTTGAGATCACATATGAAAACGCATTCACAAGAGAACTATCATATCTGTCCATTCCCTGATTGTGGAAAGAGATTTGCGCACGAGTACAAATTGAAGAACCACGTTACATCTCACCATGAAAAGAATGCGACAGCTGAAGTGGTCAAATATACCCCACCTTTCGAGAAGCAAACTAAGGCTTCTAAACCTTCTGGGGGAGCTTCTGCTTCGGCATCATCAGACCGTCCACACGCTTGCCCCTATGAAGGGTGTGAAAAGGCGTACATCCATGAATACAAGCTTAAACTCCATTTGAAAAGGGAACACCCTGGACATTTTGTAGAAGACAATGGCAATGCTCCACATAATGGGGAAAATGAGATAGAAGCCAGTGATCAAGATGGCTATGGCGGAAAACGGGTAAATGTAAAAAACCAGAAACGGAACAGGCCTAAACCAAACTTGAAGTTACCCCCTTCGAAAGTAGCACAGCGAAAAGGCGCAACGCCATCTCCTGCCCCAATGAGTGCTGCAGTTAAAAAATCATGGCGGGTTAAAGAAGAAAACTACGAAGAAGAAGAAGAAGATAGTGAAGAAACGGAGGAGGACCGTGAGAATGTGGAGGGCTGGGGATATGCTGAAAACGAAGATGATGATGAGGAAACAGAGTATGAAGATTAA | 1116 | 43.73 | METHFNHNLFDRRPIRKNTNSSVKWIKEWVPQDVVATGGKCFLFKWVTEDTLKALQEKSKQSEAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQYVCHYDGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPFPDCGKRFAHEYKLKNHVTSHHEKNATAEVVKYTPPFEKQTKASKPSGGASASASSDRPHACPYEGCEKAYIHEYKLKLHLKREHPGHFVEDNGNAPHNGENEIEASDQDGYGGKRVNVKNQKRNRPKPNLKLPPSKVAQRKGATPSPAPMSAAVKKSWRVKEENYEEEEEDSEETEEDRENVEGWGYAENEDDDEETEYED | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9994593 | 9999241 | - | Cp4.1LG01g16380.1 | Cpe01g01634 | 462947 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01634 | 371 | PANTHER | TRANSCRIPTIONAL REPRESSOR PROTEIN YY | 4 | 370 | - | - | |
Cpe01g01634 | 371 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 108 | 130 | IPR013087 | - | |
Cpe01g01634 | 371 | MobiDBLite | consensus disorder prediction | 334 | 350 | - | - | |
Cpe01g01634 | 371 | SUPERFAMILY | beta-beta-alpha zinc fingers | 80 | 130 | IPR036236 | - | |
Cpe01g01634 | 371 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 106 | 135 | IPR013087 | - | |
Cpe01g01634 | 371 | SUPERFAMILY | beta-beta-alpha zinc fingers | 224 | 252 | IPR036236 | - | |
Cpe01g01634 | 371 | MobiDBLite | consensus disorder prediction | 205 | 229 | - | - | |
Cpe01g01634 | 371 | MobiDBLite | consensus disorder prediction | 357 | 371 | - | - | |
Cpe01g01634 | 371 | Gene3D | Classic Zinc Finger | 103 | 133 | - | - | |
Cpe01g01634 | 371 | SUPERFAMILY | beta-beta-alpha zinc fingers | 151 | 192 | IPR036236 | - | |
Cpe01g01634 | 371 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 166 | 195 | IPR013087 | - | |
Cpe01g01634 | 371 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 79 | 101 | IPR013087 | - | |
Cpe01g01634 | 371 | Gene3D | Classic Zinc Finger | 134 | 161 | - | - | |
Cpe01g01634 | 371 | Gene3D | Classic Zinc Finger | 77 | 102 | - | - | |
Cpe01g01634 | 371 | Pfam | Zinc finger, C2H2 type | 136 | 160 | IPR013087 | - | |
Cpe01g01634 | 371 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 136 | 165 | IPR013087 | - | |
Cpe01g01634 | 371 | SUPERFAMILY | beta-beta-alpha zinc fingers | 121 | 163 | IPR036236 | - | |
Cpe01g01634 | 371 | Gene3D | Classic Zinc Finger | 162 | 191 | - | - | |
Cpe01g01634 | 371 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 231 | 254 | IPR013087 | - | |
Cpe01g01634 | 371 | PANTHER | BNAA03G13270D PROTEIN | 4 | 370 | - | - | |
Cpe01g01634 | 371 | Gene3D | Classic Zinc Finger | 204 | 269 | - | - | |
Cpe01g01634 | 371 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 77 | 106 | IPR013087 | - | |
Cpe01g01634 | 371 | MobiDBLite | consensus disorder prediction | 256 | 371 | - | - | |
Cpe01g01634 | 371 | SMART | c2h2final6 | 77 | 101 | IPR013087 | - | |
Cpe01g01634 | 371 | SMART | c2h2final6 | 136 | 160 | IPR013087 | - | |
Cpe01g01634 | 371 | SMART | c2h2final6 | 229 | 254 | IPR013087 | - | |
Cpe01g01634 | 371 | SMART | c2h2final6 | 106 | 130 | IPR013087 | - | |
Cpe01g01634 | 371 | SMART | c2h2final6 | 166 | 190 | IPR013087 | - | |
Cpe01g01634 | 371 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 168 | 191 | IPR013087 | - | |
Cpe01g01634 | 371 | Coils | Coil | 328 | 348 | - | - | |
Cpe01g01634 | 371 | MobiDBLite | consensus disorder prediction | 209 | 223 | - | - | |
Cpe01g01634 | 371 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 138 | 160 | IPR013087 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01634 | Cpe-Chr1:9994593 | Cpe20g00334 | Cpe-Chr20:1874271 | 3.51E-12 | dispersed | |
Cpe01g01634 | Cpe-Chr1:9994593 | Cpe09g00609 | Cpe-Chr9:4244947 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
48874 | PF00096 | zf-C2H2 | 0.00037 | CL0361 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01634 | - | - | cmax:111492851 | 699.508 |