Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01670 ATGTCCCTTCCGTCCCCTTCCCTCTTTCTCCTCTTCTTTCCTCTCTTTCTTTCTCCCCTCTCCGCCGCATCTCACCGGACCTTCCTCCCCCTCCTCCGCCACCACCGCCACCTCCTCCACCAACCCTTTTTCCCATGGACTTCATCAATGCCTCCTACTCAACCTCCTTCTCTCTCTCCCTTGCCTCAACCTCAGCACCAACAGCCCAAGCTCCCCTTCTCCTCCACTTCCTACTCCTCGCCTCCCAAACCCTTTTTTCCCTCCTACCCTTCCTCGCCCCCGCCGCCTCCGACCCCACCTTCCACGGCGCTTCCTACGTTTCCGGCTAACATTTCTGCTCTTCTCTTCCCTCAGCCTACTTCTTCTTCCCACCACCTCCACCGCCACGTCTTTGCCATTGTTATCTCTCTGTCTCTTGCTTTCTCTGTTCTTCTTCTTCTCCTTGCTCTGTTCTTCTACTTTCGTAAGCGAAACCCACAAGTCTCTGCTACTGATAAGGCCTCCGGTACTGATAATCTCCGCCTCTACCCGCCGGGTATCGACACTTCCGATGGACTTCACAAGCACAGAACCTCCTCTACTACTACCTCCAAATTTCTCTATCTTGGGACTTTGGCTACTTCTCCAGAGATTGATGAGGAGGCTCCCGGAACTGTGGATGACGGTGCCGGCGGGATTGTGGAGTCGGTTTCTCCGGTGAAAATGGGATCCCCGGAGTTGAACCCCCTTCCGCCTCTTCCTCGCCGGAATTTCGCCCAAGATTATCAAAGGAATGTTGATGGTAATGATAAGGATGATGATGAAGATGGTGAGGACGAAGAGTTCTTTTCGCCGAGAGGGTCTTCCGTCGGCGGGAAGGAGAATATGGGGAGTAATAGAAGATTGAGCCCTGTGAAATTGTTTCAATATGTGGAAACTGATAATTTCTTGAGGAAAAGCTATAATTCGAGTTTGAATTCTGGTTCACCCTCTGTTTCTGTTCCCAATAGTCCTTCTCCGCCATTGATCTTCAGCCCCACCAGCTTAATCTCGAAATCGCCTGACTCCATTATCAGATTTCCTGTTCCTGTACGGCAGCCGACGCTTCCTGTACCACCATCACCGTCGTTGTCCTCTGCTTCTTCGCCACTGGGAGGTTCCGGAAACACCAAGAACTCGCCATCGAGAGACCTCAATTTGTCGGAGCTACATCGGCAGTTCTCTAATGGATATAGAATGGATCACCAACAACCATTTCCGGTGAAACTGCCACCACCTCCACCTCCACCACCGCCACCGCCGCCTCCAATGTATTGGGAGATTCCTCAATCTTCCAATAAGGAGCCAAATCTAGGTCCACCCGTACTCACAGTGCCATCAAGACCTATACTCTCCCAGAACATAGCTCATATGTCAGCAGAGGAGCAATCAAACGCCATTGGAGATACAGAGCGAACGGAGGAAAATTCGAAGCCGAAACTGAAGGCATTGCATTGGGACAAAGTTCGAACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAATCGAGTTCTTTTCAGTTGAATGAAGAAATGATTGAATCACTTTTTATGGCGAATAACAATAATTCAAATCCAAGCAGCAAAGAAAATGGTGGTGTTCGTCAAAACATGGCTTTAGGGAATCAAGAGAATCGTGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGCTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGGAATTCAGATACTTTGGGTACCGAACTGCTCGAAAGCTTACTGAAAATGGCGCCAACGGATGACGAGGAACGTAAATTAAGAGAATACAAAGACGATTCGCCTTTTAAACTTGGCCCAGCTGAGAAATTCCTCAAAGTAGTTCTTGATGTACCTTTTGCATTCAAAAGGGTGGATGCTGTGCTTTACATTGCCAATTTCGATTCTGAGGTCGAGTACCTCGATCGGTCCTTCGAAACGCTCGAGGCTGCTTGTAAAGAATTGAAAGACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACTGGGAACCGAATGAATGTAGGCACGAACCGAGGCGATGCTCATGCCTTTAAACTCGACACCCTTCTCAAGCTTGTCGATATCAAGGGCACGGATGGAAAGACGACTCTCTTGCATTTCGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACATTCCACCTCTGATCACAACCCGGCAAATGCTGATAAAACTCAACAATCTTCCTTAACAAATGATGTCGAATTTCGAAAGCTTGGTCTTCAAGTCGTTTCGGGTCTTAGCAGGGAGCTCTCAAATGTGAAAAAAGCTGCATTAATGGATGCCGATGTGCTTAGCAACGACGTAGAGAAACTCGCTAGAGGGATCACGAAAATCACTGAGGTCATAAGATTGAACGAAGAGATGTCGAAAGGAGGGAGTAAGTCAAATTTCTCGGCCTCGATGAACAGGTTCTTGGGGAAGGCAGCTGAAGAAGTAGCAAGGATAGAAGTCCGAGAGCGCATTGTCGTCTCCATGGTCAAGGAAATAACCGAATACTTCCATGGAAACTTAGCGAAAGAAGAAGCTCGACCGCTGCGTATTTTCATGGTGGTAAAGGATTTTCTTGGCATCTTAGATCAGGTATGCAAGGAAGTTGGAAGAATCAACGAAAGAACAATAGTCGGTTCGGCTCGACAATTTACGGGGCCTTCAAGTCAAAGTCTTCCATCAATTTTCCCGGGATTGTGCGAAAGTCAACGCTACGGTTCGTCTGATGATGATAGCTCATCTTCCTCGTCTTAG 2826 47.95 MSLPSPSLFLLFFPLFLSPLSAASHRTFLPLLRHHRHLLHQPFFPWTSSMPPTQPPSLSPLPQPQHQQPKLPFSSTSYSSPPKPFFPSYPSSPPPPPTPPSTALPTFPANISALLFPQPTSSSHHLHRHVFAIVISLSLAFSVLLLLLALFFYFRKRNPQVSATDKASGTDNLRLYPPGIDTSDGLHKHRTSSTTTSKFLYLGTLATSPEIDEEAPGTVDDGAGGIVESVSPVKMGSPELNPLPPLPRRNFAQDYQRNVDGNDKDDDEDGEDEEFFSPRGSSVGGKENMGSNRRLSPVKLFQYVETDNFLRKSYNSSLNSGSPSVSVPNSPSPPLIFSPTSLISKSPDSIIRFPVPVRQPTLPVPPSPSLSSASSPLGGSGNTKNSPSRDLNLSELHRQFSNGYRMDHQQPFPVKLPPPPPPPPPPPPPMYWEIPQSSNKEPNLGPPVLTVPSRPILSQNIAHMSAEEQSNAIGDTERTEENSKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMANNNNSNPSSKENGGVRQNMALGNQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLGTELLESLLKMAPTDDEERKLREYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAVLYIANFDSEVEYLDRSFETLEAACKELKDSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDHNPANADKTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLSNDVEKLARGITKITEVIRLNEEMSKGGSKSNFSASMNRFLGKAAEEVARIEVRERIVVSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLGILDQVCKEVGRINERTIVGSARQFTGPSSQSLPSIFPGLCESQRYGSSDDDSSSSSS 941
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10453797 10457859 + Cp4.1LG01g16690.1 Cpe01g01670 462983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01670 941 PANTHER FORMIN-RELATED 28 938 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cpe01g01670 941 MobiDBLite consensus disorder prediction 50 67 - -
Cpe01g01670 941 MobiDBLite consensus disorder prediction 83 103 - -
Cpe01g01670 941 MobiDBLite consensus disorder prediction 371 390 - -
Cpe01g01670 941 MobiDBLite consensus disorder prediction 211 292 - -
Cpe01g01670 941 PANTHER FORMIN-LIKE PROTEIN 2 28 938 - -
Cpe01g01670 941 Gene3D Formin, FH2 domain 475 896 IPR042201 -
Cpe01g01670 941 MobiDBLite consensus disorder prediction 68 82 - -
Cpe01g01670 941 MobiDBLite consensus disorder prediction 406 447 - -
Cpe01g01670 941 Pfam Formin Homology 2 Domain 479 886 IPR015425 -
Cpe01g01670 941 MobiDBLite consensus disorder prediction 50 103 - -
Cpe01g01670 941 MobiDBLite consensus disorder prediction 412 433 - -
Cpe01g01670 941 SUPERFAMILY Formin homology 2 domain (FH2 domain) 419 899 - -
Cpe01g01670 941 SMART it6_source 477 901 IPR015425 -
Cpe01g01670 941 ProSiteProfiles Formin homology-2 (FH2) domain profile. 477 912 IPR015425 -
Cpe01g01670 941 MobiDBLite consensus disorder prediction 361 390 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01670 Cpe-Chr1:10453797 Cpe05g00138 Cpe-Chr5:704681 1.64E-20 dispersed
Cpe01g01670 Cpe-Chr1:10453797 Cpe15g00159 Cpe-Chr15:1315160 3.96E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01670 - - cmax:111492166 1479.15