Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01674 ATGGGCTGCATTTGCTCCAAGGGAATTCCAGCAAACGATTATTTTACTGAGAATCATTCCAAAGAGAGGCATTTGAAGTCTAATAGATCATCCAGACTTCTTGGGGCTTCATTGAGAAAAGAAGAACCTGCATTGCACGTTGATGGAGGGCGAAGTGATGCAATGGCGCTATTGATATCTAACCAACCTAGGGAAGTTAATGCTGGATCAACACCTGAATTGGATGACGCTGAGAAGGCAGCAGCCAGTGCCAAGCCACTGCGTCAAGAACAGCCAACTATGGAGGATGGAGCAAAGAGAGTAGGAGTACATAATGATAATGCAACACCTAGAATAGTTAATGTTGTTAATGTGGAAGAGGGGGCTTTGGTTATTGCTGGATGGCCTTCTTGGTTGATATCTGTGGCTGGAGAAGCAATCAATGGATTGATTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCACGATATTGAAACAAACAAGATTGTTGCATTGAAGAAGGTCGTTCGTTTCATGGCGAGGGAAATTCTTATCCTGCGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGGCTTATTACTTCAAGGGTATCGGGCAGTTTATACCTCATATTTGAGTACATGGAACATGATCTTGCAGGGTTGGCAGCAACCCCAGGGATCAAATTCACTGAAGCACAGATTAAATGCTATATGCAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCCCAAGGTGTTTTGCACCGTGACATCAAGGGCTCAAATCTTCTGATTGACAATAATGGTAACCTAAAGATAGGTGATTTTGGGCTATCAACCTTCTTCCATTCCCGTCAAAAGCAGGCTCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCACCTGAGCTTTTACTTGGTGCAAAGGACTATGAAGTTTCTGTTGATTTGTGGAGTTCAGGTTGCATTCTTGCAGAATTATATGCTGGGAAGCCTATCATGCCTGGAAGAACAGAGCGGTGTGTTGCTGAGACGTTCAAAGACTTCCCTTCCTCTGCATTGGCGCTTTTGGATGTGCTTCTTGCGGTGGAACCTGATGGCCGTGGAACAGCTTCCTCTGCCCTTCAAAGTCAGTTCTTTACCCCCAAACCGCTTCCCTCGGATCCCTCTACTTTGCCAAAGTACCCACCAAGCAAGGAGTTTGACGCGAAGCTCCGAGACGAGGAATCTCGAAGAAGAAGAGCTCCTATCAGTGTAGCACGTGAACATGAAGCAGCTCAAAAGTGTCCCAGAGAATCAAAAGCGATTCCTGCACCAGATGCAAATGCTGAATTGCAGGCATCCATACAGGTAATTAGATGGTTCGAGATGCATTTAAATACAAGCTTTTGTGTTTTAAAACTCAGGTGGGCTGATAGTTTAGTAAGTTTCAGTGAAAAGTATATTCCTGAAGAGAATGGTGGCTCTGGCTTTCGCATTGAACCCCCAAAAGAAGCAACGCAAATGGCGTCGACTGCATTGGGTTCTTCACAAAACACGAACTGGAATCAGCGTGATAATCTAAGAGGTCTTCAGTTGGAGCCAAAGGTGCAGAACTTAGAAAACAAAGATCTTATGTGCAGCATGGTGTTCGAGGTGGTTCATGATTCGGCTGTGGGCCAGAAGAAAAAGCATGAATGGTCTCACCATTTACTAGACACACCAAAATCTTCATACAAGATAGATGATCAGTCATCTGGAAAAGAGTCTACTAAGTATTCAATGGTTTTCTCAACTTTCATCAGAGTTATGCTCCAAAGAAGAGAATTCACTACTCAGGGGACCCCTGATGCCTGCTGGTGGAAACCT 1875 44.8 MGCICSKGIPANDYFTENHSKERHLKSNRSSRLLGASLRKEEPALHVDGGRSDAMALLISNQPREVNAGSTPELDDAEKAAASAKPLRQEQPTMEDGAKRVGVHNDNATPRIVNVVNVEEGALVIAGWPSWLISVAGEAINGLIPRKADSFQKLDKIGQGTYSSVYRAHDIETNKIVALKKVVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLAATPGIKFTEAQIKCYMQQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFHSRQKQALTSRVVTLWYRPPELLLGAKDYEVSVDLWSSGCILAELYAGKPIMPGRTERCVAETFKDFPSSALALLDVLLAVEPDGRGTASSALQSQFFTPKPLPSDPSTLPKYPPSKEFDAKLRDEESRRRRAPISVAREHEAAQKCPRESKAIPAPDANAELQASIQVIRWFEMHLNTSFCVLKLRWADSLVSFSEKYIPEENGGSGFRIEPPKEATQMASTALGSSQNTNWNQRDNLRGLQLEPKVQNLENKDLMCSMVFEVVHDSAVGQKKKHEWSHHLLDTPKSSYKIDDQSSGKESTKYSMVFSTFIRVMLQRREFTTQGTPDACWWKP 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10528187 10536624 + Cp4.1LG01g16760.1 Cpe01g01674 462987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01674 625 SUPERFAMILY Protein kinase-like (PK-like) 146 396 IPR011009 -
Cpe01g01674 625 SMART serkin_6 151 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01674 625 Pfam Protein kinase domain 151 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01674 625 PANTHER CELL DIVISION PROTEIN KINASE 98 348 - -
Cpe01g01674 625 PANTHER KINASE CDK9, PUTATIVE-RELATED 98 348 - -
Cpe01g01674 625 ProSiteProfiles Protein kinase domain profile. 151 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01674 625 MobiDBLite consensus disorder prediction 408 439 - -
Cpe01g01674 625 MobiDBLite consensus disorder prediction 64 102 - -
Cpe01g01674 625 MobiDBLite consensus disorder prediction 382 442 - -
Cpe01g01674 625 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524
Cpe01g01674 625 Gene3D Transferase(Phosphotransferase) domain 1 225 428 - -
Cpe01g01674 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Cpe01g01674 625 PANTHER KINASE CDK9, PUTATIVE-RELATED 348 534 - -
Cpe01g01674 625 Gene3D Phosphorylase Kinase; domain 1 140 224 - -
Cpe01g01674 625 PANTHER CELL DIVISION PROTEIN KINASE 348 534 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00492 Cpe01g01674 CCT
Cpe01g01674 Cpe14g00334 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01674 Cpe-Chr1:10528187 Cpe02g01011 Cpe-Chr2:9322587 1.21E-165 dispersed
Cpe01g01674 Cpe-Chr1:10528187 Cpe14g00334 Cpe-Chr14:2027755 3.99E-171 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62160 PF00069 Pkinase 1.80E-60 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01674 - - cpep:111793025 881.322