Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01675 ATGGCACTGGTGATACACGCAGGAAAGACGAATAAAAATTCTTTCAAGGCTCTCATTGCTGCAGAGTACAATGGAGTCGAAGTGAAATTGATCCCAGACTTTGAGATGGGAGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTTCCTGTTTTAGAAACGCCCGATGGCCCCATATTTGAGAGCAATGCGATAGCCCGTTATGTTGCACGCTTGAAGGCTGATAGTCCTCTGTTTGGTTCATCTTCGATAGATTATGGGCATATTGAACAATGGATTGATTTTGCATCATTAGAGATAGATCCTAATATTTTGACTTGGTATAGACCTAGAATTGGGAGAGCTGCTTATCTTCCACCTGTTGAGGAAGCTGCAATTGCTGCATTGAAGAGAGGTTTGGGAGCTTTGAATACGCACCTTGCTTCAAACACATACCTAGTTGGTCATTTTGTAACATTAGCTGACATCATCATGACTTGCAACCTCTTATTGGGTTTTACTAAGTTAATGACTAAGAGCTTTACCTCAGAGTTCCCACATGTTGAGAGGTACTTCTGGACCTTAGTCAATCAACCAAACTTCAAAAAAATTCTGGGTGAGGTGAGGCAGGCAGAGTCAGTTCCACCTGTTCAATCTGCTAAGAAACCTGATGAATCTGCTAAGCAAAAGCACAAAGATGAGGTAAAGAAAGAACCTAAAAAGGAAGCAGAAAAAGAGAAGCCCAAGGCGGTAGTTGGCGAGGGAGAGGATGAGGCACCAAAGCCTAAACCCAAAAATCCTCTCGATTTGCTTCCTCCCAGTAAGATGATTCTGGACGAGTGGAAGCGGCTGTACTCGAATACCAAAACCAACTTCCGGGAGGTTGCAATCAAAGGATTTTGGGACATGTACGATCCAGAGGGATATTCTCTTTGGTTCTGTGATTACAAGTACGACGATGAGAATACTGTTTCGTTCGTGACTTTGAACAAGGTTGGTGGCTTTCTCCAGCGGATGGATCTCGCACGTAAGTATGCTTTCGGGAAGATGTTAGTGATTGGATCCGAACCTCCATTTAAGGTGAAGGGATTGTGGCTGTTCCGTGGGCAAGAGATCCCAAAGTTCGTCCTGGACGAGTGCTATGACATGGAACTGTATGAATGGAGGAAGGTGGATATATCAGACGAGGCACAAAAGGAACGCGTGAACCAGATGATTGAAGATCATGAGCCTTTTGAAGGAGAGGCTTTGTTGGACGCCAAATGCTTCAAGTGA 1269 44.21 MALVIHAGKTNKNSFKALIAAEYNGVEVKLIPDFEMGVSNKTPEFIKMNPIGKVPVLETPDGPIFESNAIARYVARLKADSPLFGSSSIDYGHIEQWIDFASLEIDPNILTWYRPRIGRAAYLPPVEEAAIAALKRGLGALNTHLASNTYLVGHFVTLADIIMTCNLLLGFTKLMTKSFTSEFPHVERYFWTLVNQPNFKKILGEVRQAESVPPVQSAKKPDESAKQKHKDEVKKEPKKEAEKEKPKAVVGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYDDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVLDECYDMELYEWRKVDISDEAQKERVNQMIEDHEPFEGEALLDAKCFK 422
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10548828 10551832 + Cp4.1LG01g16740.1 Cpe01g01675 462988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01675 422 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 262 422 IPR036433 GO:0003746|GO:0006414
Cpe01g01675 422 Pfam Glutathione S-transferase, N-terminal domain 11 76 IPR004045 -
Cpe01g01675 422 Pfam Elongation factor 1 gamma, conserved domain 261 369 IPR001662 GO:0003746|GO:0006414
Cpe01g01675 422 CDD GST_C_EF1Bgamma_like 90 210 - -
Cpe01g01675 422 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Cpe01g01675 422 SUPERFAMILY Thioredoxin-like 3 84 IPR036249 -
Cpe01g01675 422 Pfam Glutathione S-transferase, C-terminal domain 128 197 IPR004046 -
Cpe01g01675 422 Gene3D Glutaredoxin 2 74 - -
Cpe01g01675 422 SFLD Glutathione Transferase (cytosolic) 6 190 IPR040079 -
Cpe01g01675 422 SMART EF1G_2 261 369 IPR001662 GO:0003746|GO:0006414
Cpe01g01675 422 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 262 422 IPR001662 GO:0003746|GO:0006414
Cpe01g01675 422 Gene3D - 80 217 - -
Cpe01g01675 422 SUPERFAMILY eEF1-gamma domain 262 422 IPR036433 GO:0003746|GO:0006414
Cpe01g01675 422 CDD GST_N_EF1Bgamma 3 77 - -
Cpe01g01675 422 PANTHER - 1 422 - -
Cpe01g01675 422 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Cpe01g01675 422 MobiDBLite consensus disorder prediction 210 269 - -
Cpe01g01675 422 SFLD Main (cytGST) 6 190 - -
Cpe01g01675 422 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 422 IPR044628 GO:0004364
Cpe01g01675 422 SUPERFAMILY GST C-terminal domain-like 73 214 IPR036282 -
Cpe01g01675 422 MobiDBLite consensus disorder prediction 221 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00810 Cpe-Chr1:4837950 Cpe01g01675 Cpe-Chr1:10548828 0 dispersed
Cpe01g01675 Cpe-Chr1:10548828 Cpe07g00339 Cpe-Chr7:2214690 2.35E-11 dispersed
Cpe01g01675 Cpe-Chr1:10548828 Cpe14g00666 Cpe-Chr14:4378199 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01675 K03233 - zju:107412556 715.301