Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01686 ATTGCTTACCAAGACATTATAGACGCAACCGAAGACTTCGATATCAAATATTGCATTGGCACGGGTGGGTTTGGGAGCGTCTACCGAGCGACGCTTCCCATTGGAAAAGTTGTAGCTTTAAAGAAGCTTCATAGTTCTGAAGCAGCCAAATGGGAAACCCTTACCAAGAGTTTTCAAAATGAGATTGAGATGCTAAAAGAGATTAGGCACAAGAACATCTTAAAGCTCCTTGGTTATTGCCTCCATAAACGTTGCATGTTTCTCATTTACGAGTACATGGAGAGTGGAAGTCTATTTTGGGTGCTGAGCAATGATACAGAAGCAGAGGAATTGAAGTGGAATAGGAGACTAAATGTCATTAATAGAGTTGCCCAAGCTTTGTCCTACTTACATCATGATTGCACCATGCCTATCCTTCATCGAGACGTTACGACCAATAATATACTTCTGGACTCGAATCTTGACGCTTTTCTGTCGGATTTCGGGGTAGCAAGATTTCTTGATGTTGAATCTTCCAATCACACCGTGGTTCGCGGCACGTATGGCTACATTGCTCCAGAATTGGCATACACAACAGTCGTCACAGAAAAATGTGATGTTTATAGCTTTGGAGTGGTGGCATTAGAAACAATAATAGGAAAACACCCTCGAGAATTGTTAAACAATTTATGGTCGAAAACTACTCCAAATGTAGCTATCAAGGAATTGTTGGACATACGTCTAAGATCTCCTTTAACCCAAAATGGAGTAGCTCAAAGAATAGTTGTTGCACTAACGCTGGCTTTTGCATGCCTCCATCCAAACCCAACAGCTCGACCAACAATGCAGCATGTGAGTAGACAACTTCTTGTTCCAAGACCTGGTCTAGAAATCTCATTCAATGAGGTTTTAGTTGAACAAATTTTAAGACAGGAAATATACCAAGTACATATGACTTCAGAATAA 945 40.74 IAYQDIIDATEDFDIKYCIGTGGFGSVYRATLPIGKVVALKKLHSSEAAKWETLTKSFQNEIEMLKEIRHKNILKLLGYCLHKRCMFLIYEYMESGSLFWVLSNDTEAEELKWNRRLNVINRVAQALSYLHHDCTMPILHRDVTTNNILLDSNLDAFLSDFGVARFLDVESSNHTVVRGTYGYIAPELAYTTVVTEKCDVYSFGVVALETIIGKHPRELLNNLWSKTTPNVAIKELLDIRLRSPLTQNGVAQRIVVALTLAFACLHPNPTARPTMQHVSRQLLVPRPGLEISFNEVLVEQILRQEIYQVHMTSE 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10756721 10757739 + Cp4.1LG01g16840.1 Cpe01g01686 462999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01686 314 SUPERFAMILY Protein kinase-like (PK-like) 3 282 IPR011009 -
Cpe01g01686 314 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 296 - -
Cpe01g01686 314 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 296 - -
Cpe01g01686 314 ProSitePatterns Tyrosine protein kinases specific active-site signature. 138 150 IPR008266 GO:0004672|GO:0006468
Cpe01g01686 314 PIRSF ILK 5 283 - -
Cpe01g01686 314 ProSitePatterns Protein kinases ATP-binding region signature. 19 41 IPR017441 GO:0005524
Cpe01g01686 314 Gene3D Transferase(Phosphotransferase) domain 1 93 287 - -
Cpe01g01686 314 ProSiteProfiles Protein kinase domain profile. 13 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01686 314 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Cpe01g01686 314 Pfam Protein kinase domain 17 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01686 Cpe-Chr1:10756721 Cpe10g01134 Cpe-Chr10:7999416 1.80E-115 dispersed
Cpe17g00335 Cpe-Chr17:2362827 Cpe01g01686 Cpe-Chr1:10756721 7.01E-35 dispersed
Cpe01g01686 Cpe-Chr1:10756721 Cpe05g00090 Cpe-Chr5:430776 2.87E-53 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62161 PF00069 Pkinase 1.60E-48 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01686 - - cpep:111777464 631.328