Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01727 | ATGGGAGGAACTAGTTTGGGAAGCTTGGTAATGGTCTTTGTTCTTGTTTTGACATCGTTATTGGCCGTTGTTCCGATATCCGAGGCACAACTCCGACAGAATTTCTATGCAGATGTTTGCCCTAACGTCGAGAGTATAGTTCGAACTGCAGTCACGAAGAAGTTTCGACAAACGTTTGTTACAGTTCCTGCTACTCTCCGCCTCTTCTTCCATGATTGTTTTGTTCAGGGATGTGACGCGTCGGTGATGATTGGCTCGAATGGAGGCAATCAAGTAGAAAAAGATCATCCAGATAATCTTTCACTAGCAGGAGATGGATTCGATACGGTGATAAAAGCGAAAGCAGCAGTTGACGCTGTGCCGGAGTGTAGAAATAAAGTCTCGTGCGCGGATATTCTTGTGATGGCGACTCGAGATGTCATTTCATTGGTTCGTGCTCTCACCGAGTCATGGTAA | 456 | 45.61 | MGGTSLGSLVMVFVLVLTSLLAVVPISEAQLRQNFYADVCPNVESIVRTAVTKKFRQTFVTVPATLRLFFHDCFVQGCDASVMIGSNGGNQVEKDHPDNLSLAGDGFDTVIKAKAAVDAVPECRNKVSCADILVMATRDVISLVRALTESW | 151 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11829491 | 11830009 | + | Cp4.1LG01g17260.1 | Cpe01g01727 | 463040 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01727 | 151 | SUPERFAMILY | Heme-dependent peroxidases | 30 | 144 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe01g01727 | 151 | PRINTS | Haem peroxidase superfamily signature | 62 | 76 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe01g01727 | 151 | PRINTS | Haem peroxidase superfamily signature | 127 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe01g01727 | 151 | ProSiteProfiles | Plant heme peroxidase family profile. | 30 | 151 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe01g01727 | 151 | Pfam | Peroxidase | 48 | 144 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe01g01727 | 151 | PANTHER | - | 8 | 143 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe01g01727 | 151 | Gene3D | - | 31 | 150 | - | - | |
Cpe01g01727 | 151 | ProSitePatterns | Peroxidases active site signature. | 62 | 73 | IPR019794 | GO:0004601 | |
Cpe01g01727 | 151 | PANTHER | PEROXIDASE 50-RELATED | 8 | 143 | - | - | |
Cpe01g01727 | 151 | PRINTS | Plant peroxidase signature | 126 | 136 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe01g01727 | 151 | PRINTS | Plant peroxidase signature | 64 | 84 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe01g01727 | 151 | PRINTS | Plant peroxidase signature | 105 | 118 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cpe01g01727 | 151 | PRINTS | Plant peroxidase signature | 40 | 59 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01727 | Cpe-Chr1:11829491 | Cpe19g00257 | Cpe-Chr19:2135988 | 1.00E-91 | dispersed | |
Cpe01g01727 | Cpe-Chr1:11829491 | Cpe19g00661 | Cpe-Chr19:5296903 | 8.92E-70 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01727 | K00430 | - | csv:101208254 | 239.195 |