Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01727 ATGGGAGGAACTAGTTTGGGAAGCTTGGTAATGGTCTTTGTTCTTGTTTTGACATCGTTATTGGCCGTTGTTCCGATATCCGAGGCACAACTCCGACAGAATTTCTATGCAGATGTTTGCCCTAACGTCGAGAGTATAGTTCGAACTGCAGTCACGAAGAAGTTTCGACAAACGTTTGTTACAGTTCCTGCTACTCTCCGCCTCTTCTTCCATGATTGTTTTGTTCAGGGATGTGACGCGTCGGTGATGATTGGCTCGAATGGAGGCAATCAAGTAGAAAAAGATCATCCAGATAATCTTTCACTAGCAGGAGATGGATTCGATACGGTGATAAAAGCGAAAGCAGCAGTTGACGCTGTGCCGGAGTGTAGAAATAAAGTCTCGTGCGCGGATATTCTTGTGATGGCGACTCGAGATGTCATTTCATTGGTTCGTGCTCTCACCGAGTCATGGTAA 456 45.61 MGGTSLGSLVMVFVLVLTSLLAVVPISEAQLRQNFYADVCPNVESIVRTAVTKKFRQTFVTVPATLRLFFHDCFVQGCDASVMIGSNGGNQVEKDHPDNLSLAGDGFDTVIKAKAAVDAVPECRNKVSCADILVMATRDVISLVRALTESW 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11829491 11830009 + Cp4.1LG01g17260.1 Cpe01g01727 463040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01727 151 SUPERFAMILY Heme-dependent peroxidases 30 144 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cpe01g01727 151 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g01727 151 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g01727 151 ProSiteProfiles Plant heme peroxidase family profile. 30 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g01727 151 Pfam Peroxidase 48 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cpe01g01727 151 PANTHER - 8 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g01727 151 Gene3D - 31 150 - -
Cpe01g01727 151 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Cpe01g01727 151 PANTHER PEROXIDASE 50-RELATED 8 143 - -
Cpe01g01727 151 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g01727 151 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g01727 151 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cpe01g01727 151 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01727 Cpe-Chr1:11829491 Cpe19g00257 Cpe-Chr19:2135988 1.00E-91 dispersed
Cpe01g01727 Cpe-Chr1:11829491 Cpe19g00661 Cpe-Chr19:5296903 8.92E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01727 K00430 - csv:101208254 239.195