Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01728 ATGCAAACGATGGCCAGACCCACATCATTCGCCATCGCCGTCACATGGGCCACTCTAATGGCCTTGACCACTGTGGTGGAGGCCAACCTGGACGTGGGTGTGAATTGGGGAACAATAGCATCCCACCCAATAAATCCAAGCATTGTGGTCAACTTGCTCAAAGACAATGGGATCAAGAAGGTTAAGCTCTTCGATTCAGACTCTTGGATAATGGGTGCATTGGCTGGTTCCAAAATTGAGACCGTTGTGGCCATTCCTAATGACCAGCTTCAGAAATTTGCTAATGATTACGACCTTGCTAAGGATTGGGTTAAGGAAAATGTCACCGCCTATATTTACAACGGAGGCGTCGATATCAGGTACGTAGCTGTGGGAAACGAACCATTTTTAACGGGCTTCAATGGAAGCTACATAAAACTAACATTTCCGGCCATGCAAAACATACAAAAGGCTCTCAATGATGCTGGCCATGGTGACAAGATCAAAGTAACAACGCCGCTGAATGCCGATGTCTACGAGTCACCATCGAACCAGCCCTCGGATGGGCGGTTCCGATCAGACATCCATGACACAATGAAAAATATAGTTCATTTCCTAAGCAGCAACAATGCTCCCTTCATGGTGAACATCTACCCTTTCCTCAGTCTCTACCAGAACCCCGACTTTCCAATCGACTTTGCTTTCTTAGACAGTTCCGGGAAGTCGATAAATGACAAGGGAAAGACATATACAAACGTGTTCGATGCAAACTACGACACGCTAGTCTGGTCGTTGAAGAAGATCGGTGAGGGGGATTTGAAGATCGTCGTAGGAGAGGTGGGGTGGCCGACCGACGCTAATAAGTATGCTAACTTGGAGTTGGCGAAGAGGTTTTATGATGGGCTGTTTAAGAATCTGGCTAGCAAGAAGGGGACTCCCATGAGGCCAGATGAGAAGCTTGAAATTTATTTGTTTAGCCTTTTTGATGAGGATATGAAGAGCGTTCTCCCTGGCTTCTTTGAGCGCCATTGGGGAATTTTCAGGTATGATGGGAAACCAAAGTTCCCGATGGACTTAGCAGGCAATGGGAATGACAAGATGCCAGTTGCAGCAAAGGGAGTTCAATACTTGGAAAAAAAATGGTGTGTGATTAAGAACAGCATCGAGGACTTAACATCAGAAGTAAGTCAGATCGACTATGCCTGCTCCTTGTCCGACTGCACAACCTTGGTGTTTGGATCTTCATGCAACGACTTGAACGCTAGAGGCAACTTTTCTTTTGCTTACAACATGTATTTCCAGATGCAAGACCAGAGCGTTGAAGCTTGTGATTTTGGTGGATCTGCTGAGATTGTCACCAAAAATGCCTCCGTTGGCACTTGCTTGTTCCCCATCCAGATTGTCAGCGCTGGGCACCAGTTGACGATGATGAATGTCGTCCCCTTTGTGTCCACCGTATTT 1440 46.53 MQTMARPTSFAIAVTWATLMALTTVVEANLDVGVNWGTIASHPINPSIVVNLLKDNGIKKVKLFDSDSWIMGALAGSKIETVVAIPNDQLQKFANDYDLAKDWVKENVTAYIYNGGVDIRYVAVGNEPFLTGFNGSYIKLTFPAMQNIQKALNDAGHGDKIKVTTPLNADVYESPSNQPSDGRFRSDIHDTMKNIVHFLSSNNAPFMVNIYPFLSLYQNPDFPIDFAFLDSSGKSINDKGKTYTNVFDANYDTLVWSLKKIGEGDLKIVVGEVGWPTDANKYANLELAKRFYDGLFKNLASKKGTPMRPDEKLEIYLFSLFDEDMKSVLPGFFERHWGIFRYDGKPKFPMDLAGNGNDKMPVAAKGVQYLEKKWCVIKNSIEDLTSEVSQIDYACSLSDCTTLVFGSSCNDLNARGNFSFAYNMYFQMQDQSVEACDFGGSAEIVTKNASVGTCLFPIQIVSAGHQLTMMNVVPFVSTVF 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11888206 11891748 - Cp4.1LG01g17290.1 Cpe01g01728 463041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01728 480 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Cpe01g01728 480 Gene3D - 369 464 - -
Cpe01g01728 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 466 IPR044965 GO:0004553|GO:0005975
Cpe01g01728 480 SUPERFAMILY (Trans)glycosidases 32 351 IPR017853 -
Cpe01g01728 480 Pfam X8 domain 373 442 IPR012946 -
Cpe01g01728 480 Gene3D Glycosidases 31 359 - -
Cpe01g01728 480 Pfam Glycosyl hydrolases family 17 32 351 IPR000490 GO:0004553|GO:0005975
Cpe01g01728 480 PANTHER BETA-1,3-GLUCANASE 13 466 - -
Cpe01g01728 480 SMART X8_cls 373 456 IPR012946 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g00810 Cpe01g01728 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01728 Cpe-Chr1:11888206 Cpe19g00561 Cpe-Chr19:4746139 0 dispersed
Cpe01g01728 Cpe-Chr1:11888206 Cpe03g00924 Cpe-Chr3:6139254 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01728 - - csv:101215478 753.436