Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01758 | ATGAAGGAGGAAGGAGAGTGCTTTCAGGGGTTTCAAGACCACCTCCTAATGCAACAATTCCAGACTATGCAACAAAACAGCGACGTTTTTGGAGTAGGAGGTGGTGGAGGAGGAGGAGGAGGCTTGATTTTTCCTGAAGTTTCTCCTATGATGTTTACGCCTCCGTGGACCGCGACCACAACCATCCCTCAAGTCCACCACGACCCCTTCATCCCGCCGCCGCCCCCACCTTCCTACGCCAGCTTCTTCAATAGGAGAAATGCTTCTCTGCAGTTCCCTTACGATATTGGGAACAATAGCCTTGGAATTGGGCATATGGGTCAGCCTGGGTCTTGCCCCTTTGGGCTGCAGGCCGAGCTCAGTAAGATGAGCGCTCAAGAAATAATGGACGCCAAAGCTCTTGCTGCCTCTAAAAGCCATAGTGAAGCTGAGAGACGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGTTACGAAGCTTACTCCCAAGTACCACCAAAACGGACAAGGCCTCCTTGCTTGCAGAGGTAATTCAACATGTAAAAGAGCTGAAACGCCAGACGACATTGATAGCTGATGTAAGTCCAGTTCCGACCGAGCTCGACGAGCTATCAGTTGACGTCGATGCATCCGACGAGGACGGTAAGTTCGTGATAAAAGCCTCACTTTGTTGTGAGGACAGGTCCGATCTTCTCCCACAGATCATTAAAACCCTGAAATCCCTCCGGTTGAGAACCCTAAAAGCGGAGATCACGACGCTGGGCGGCCGAGTAAAGAACGTATTGTTTATCACTGGGGACGACGACTCGTCCAGCGACCAAGAGGAGGCTGAACAGCAGCAGCACCAATACAGCATCAGTTCCATTCAGGAAGCCCTAAAGGGAGTGATGGAAAAGGTTTGTAGCGAAGACCAATCATCCTCAGGCAGCATCAAAAGACAAAGGACCAATAATCACAACAACGTCAATATTTAG | 975 | 49.64 | MKEEGECFQGFQDHLLMQQFQTMQQNSDVFGVGGGGGGGGGLIFPEVSPMMFTPPWTATTTIPQVHHDPFIPPPPPPSYASFFNRRNASLQFPYDIGNNSLGIGHMGQPGSCPFGLQAELSKMSAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTTLIADVSPVPTELDELSVDVDASDEDGKFVIKASLCCEDRSDLLPQIIKTLKSLRLRTLKAEITTLGGRVKNVLFITGDDDSSSDQEEAEQQQHQYSISSIQEALKGVMEKVCSEDQSSSGSIKRQRTNNHNNVNI | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 13150680 | 13152649 | + | Cp4.1LG01g17700.1 | Cpe01g01758 | 463071 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01758 | 324 | CDD | bHLH_AtAIG1_like | 130 | 209 | - | - | |
Cpe01g01758 | 324 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 58 | 322 | - | - | |
Cpe01g01758 | 324 | SMART | finulus | 141 | 190 | IPR011598 | GO:0046983 | |
Cpe01g01758 | 324 | Gene3D | - | 130 | 190 | IPR036638 | GO:0046983 | |
Cpe01g01758 | 324 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 135 | 184 | IPR011598 | GO:0046983 | |
Cpe01g01758 | 324 | MobiDBLite | consensus disorder prediction | 298 | 324 | - | - | |
Cpe01g01758 | 324 | MobiDBLite | consensus disorder prediction | 301 | 324 | - | - | |
Cpe01g01758 | 324 | Pfam | Helix-loop-helix DNA-binding domain | 138 | 184 | IPR011598 | GO:0046983 | |
Cpe01g01758 | 324 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 58 | 322 | IPR045847 | GO:0003700|GO:0006355 | |
Cpe01g01758 | 324 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 139 | 189 | IPR036638 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g01758 | Cpe09g00272 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01758 | Cpe-Chr1:13150680 | Cpe01g02508 | Cpe-Chr1:20594562 | 1.30E-38 | dispersed | |
Cpe01g01365 | Cpe-Chr1:8212035 | Cpe01g01758 | Cpe-Chr1:13150680 | 1.27E-105 | wgd | |
Cpe01g01758 | Cpe-Chr1:13150680 | Cpe09g00272 | Cpe-Chr9:1586058 | 1.57E-100 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
48884 | PF00010 | HLH | 1.50E-12 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01758 | - | - | pvy:116145962 | 359.762 |