Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01802 ATGAAACCCCTTGTTCTTGGAATGGCGTTGGCTAACAATCTATATGGGTTTCTTCCTTCTTCTCTCGGGGCTCTTTCTGGCCTCCGCCATGTCAATTTCAGGAACAATAGGCTGTTTGGGAGCTTGCCTTCACCGCTCTTTTCCGCTCAACGCCTACAAAGCTTGGTTCTCTATGGGAATTCCTTTTCTGGGTCTGTTCCAAATGGGATTGGTAAGCTTAAATTCCTTCAAACTCTGGATTTATCTCAAAATCTCTTTAATGGGTCATTACCCACTTCGATTCTTCAATGCAAGAGGCTTAAAACCCTTGATCTTAGTCAGAATAACTTCACTGGTTCACTGCCTCATGGGTTTGGAACTAGCTTGAGTTCTTTGGAGAAACTTGATCTTTCATTCAACAGCTTTGATGGTTCTGTTCCTAATGATTTGGGGAATTTGGGTAGCTTACAAGGAACTCTTGACTTGTCTCATAATCATTTCTCTGGTTCAATCCCTTCTAGCCTTGGGAACTTACCTGAAAAGGTTTACATTGATCTCAGCTACAACAATTTGAATGGTCCAATACCCCAAAATGGTGCTCTTATGAACAGAGGACCCACTGCTTTTATTGGGAATCCTGGGCTCTGTGGTTCCCCATTGAAGAACACATGTTCTTCACCATCATTGCTGCCATTTCTCCCAAGGACTTATGGTGAAAACGCTAAGAAGGCCAGTGGATTAAGTAAGAGTGCTGTGATTGCCATAGTACTTGGTGATATGATTGGCATATGTTTAGTTGGGTTATTGATCTCCTATTGTTATTCTAAACTGTTCAATCCAAGAAACAGCAGAGAATGTTTATGTTTCAGGAAGGATGAATCCGAGACGGTTTCACAGAACGTTGAGCAGCTCGATCTCGTGGCATTGGATGAACAAGTTGAGTTTGATCTTGATGAACTTCTGAAAGCATCAGCATTCATTCTTAGCAAAAGTGGGATTGGGATAATGTATAAAGTGGTGCTTGACAACGGCGTTACGTTGGCCGTGCGACGATTAGGCGAAGGCGGTACTCAAAGGCTCAAAGAGTTTCAAACAGAAGTAGAAGCCATAGCAAAGCTAAGACATCCTAATCTTGTCACTCTTAGAGCCTATTACTGGTCTGTTGATGAGAAGCTGCTCATTTATGAGCTAAAGATCATGAAAGGAATTGCTAAAGGAATGGTTTATCTCCATGAATTCAGCCCCAAGAAGTATGTTCATGGAGATTTGAAGCCCAACAACATACTTCTCAGTGAGAACATGGAAGCCAAAGTTTCAGACTTTGGCTTAGCTCGACTTGCCAACATAGCTGGAGTAACCCCGACCGTACAATCGAATCGAGTGGCATCGAATAAACCGTTAGATCCAAAGCCATCGAAAACCGTAACGTCCGAGATCATTTGCAGTTCATCTTCCAATACTGGAACTTATTATCAAGCTCCTGAATCACTCAAAGTCTTGAAACCATCTCAAAAATGGGATGTTTACTCATATGGTGTGATCTTACTTGAAATGATCACTGGAAGATTCCCATTAATCCAAGTGAGTTCTTCCTCTGAAATGGATCTTGTTCATTGGATCCAGCTCTGCATTGAAGAACAAAAGCCAATTTCAGAAGTCATTGATCCATATCTAGTTCGAAATGCAGATAACGAAGAAGAGATCGTCTCGGTACTAAAACTTGCAATGGCTTGTGTTCATGGAAGCCCTGAAAGGAGACCTTCCATGAGACACATCTCGGACGCGCTCGAAAGGGTATCGTTTGAACCGAGGAAT 1794 42.25 MKPLVLGMALANNLYGFLPSSLGALSGLRHVNFRNNRLFGSLPSPLFSAQRLQSLVLYGNSFSGSVPNGIGKLKFLQTLDLSQNLFNGSLPTSILQCKRLKTLDLSQNNFTGSLPHGFGTSLSSLEKLDLSFNSFDGSVPNDLGNLGSLQGTLDLSHNHFSGSIPSSLGNLPEKVYIDLSYNNLNGPIPQNGALMNRGPTAFIGNPGLCGSPLKNTCSSPSLLPFLPRTYGENAKKASGLSKSAVIAIVLGDMIGICLVGLLISYCYSKLFNPRNSRECLCFRKDESETVSQNVEQLDLVALDEQVEFDLDELLKASAFILSKSGIGIMYKVVLDNGVTLAVRRLGEGGTQRLKEFQTEVEAIAKLRHPNLVTLRAYYWSVDEKLLIYELKIMKGIAKGMVYLHEFSPKKYVHGDLKPNNILLSENMEAKVSDFGLARLANIAGVTPTVQSNRVASNKPLDPKPSKTVTSEIICSSSSNTGTYYQAPESLKVLKPSQKWDVYSYGVILLEMITGRFPLIQVSSSSEMDLVHWIQLCIEEQKPISEVIDPYLVRNADNEEEIVSVLKLAMACVHGSPERRPSMRHISDALERVSFEPRN 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14985673 14987953 - Cp4.1LG01g18170.1 Cpe01g01802 463115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01802 598 SUPERFAMILY L domain-like 12 213 - -
Cpe01g01802 598 Gene3D Ribonuclease Inhibitor 5 220 IPR032675 -
Cpe01g01802 598 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 12 389 - -
Cpe01g01802 598 ProSiteProfiles Protein kinase domain profile. 315 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01802 598 Gene3D Transferase(Phosphotransferase) domain 1 387 595 - -
Cpe01g01802 598 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 390 593 - -
Cpe01g01802 598 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 389 - -
Cpe01g01802 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Cpe01g01802 598 Pfam Leucine rich repeat 99 160 IPR001611 GO:0005515
Cpe01g01802 598 SMART serkin_6 319 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01802 598 Pfam Protein kinase domain 391 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01802 598 SUPERFAMILY Protein kinase-like (PK-like) 321 590 IPR011009 -
Cpe01g01802 598 Gene3D Phosphorylase Kinase; domain 1 282 386 - -
Cpe01g01802 598 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 390 593 - -
Cpe01g01802 598 SMART LRR_typ_2 122 145 IPR003591 -
Cpe01g01802 598 SMART LRR_typ_2 73 97 IPR003591 -
Cpe01g01802 598 SMART LRR_typ_2 25 49 IPR003591 -
Cpe01g01802 598 SMART LRR_typ_2 146 171 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01802 Cpe-Chr1:14985673 Cpe09g00581 Cpe-Chr9:4019405 2.76E-164 dispersed
Cpe16g00238 Cpe-Chr16:4460289 Cpe01g01802 Cpe-Chr1:14985673 5.53E-33 dispersed
Cpe01g01329 Cpe-Chr1:7998923 Cpe01g01802 Cpe-Chr1:14985673 0 wgd
Cpe01g01329 Cpe-Chr1:7998923 Cpe01g01802 Cpe-Chr1:14985673 0 wgd
Cpe01g01802 Cpe-Chr1:14985673 Cpe09g00320 Cpe-Chr9:1913703 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62163 PF00069 Pkinase 4.30E-23 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01802 - - csv:101203259 963.37