Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01843 ATGAAGAGGGAGCATCATCATCTTCATCCTGGCCCGGAGCCGCCTTCCATGGCTGCCGCTCCTAATGGAGACACTTATTTGAATACTGGAAAGGCTAAGCTCTGGGAGGAGGACGCTCAGCTCGATGGAGGAATGGATGAGCTTCTCGCTGTTTTGGGTTACAAGGTTAAGTCGTCGGACATGGCGGAAGTTGCGCAGAAGCTCGAACAGCTTGAAGAAGCTATGTGTCAAGTTCAGGATACTGGCCTTTCGCATCTAGCTTTCGATACGGTTCACTATAATCCCTCTGATCTGTCGACTTGGCTTGAAAGTATGATAACGGAGCTTCATCCGCCGCCTAGTTTTCCGCAGCCGCCTCCCTCGCAGATGAACGATTCGTCGTTTTTAGCCCCGGCGGAATCCTCCACCATCACTTCTATTGATTACGACCCCCAACGACAAACCAGCAGCCTGATTTTTGAGGAGTCTTCCAGTTCTGATTACGACCTTAAAGCTATTACGAGCAGCGCGATTTATTCACCAAGAGAGAACAAGCGTTTGAAACCCTCGTCCGAGTCGGACCCGGATTTATTCTCTACCTCGGCGATTGGGGCATCCGATTCTGCAACTCGCCCCATAGTCCTCGTCGACTCGCAGGAGAATGGAATTCAACTGGTTCATGCTTTGATGGCCTGCGCCGAAGCCGTGCAGCAGAACAATCTGAATCTGGCGGAGGCTCTGGTGAAGCGAATCGGGTACTTGGCGGTTTCTCAAGCCGGAGCGATGCGGAAGGTCGCCACGTTCTTTGCCGAAGCATTGGCACGCCGAATCTATAGGGTCTGCCCTGAAAATCCCCTCGATCATTCAATGTCCGATATGCTTCAATTGCATTTCTACGAGAGCTGTCCGTATTTGAAATTCGCACATTTCACCGCGAATCAAGCGATTCTTGAGGCCTTCGAAGGGAAGAAGCGCGTTCACGTAATCGATTTCTCGATGAACCAAGGGATGCAGTGGCCGGCTCTGCTTCAAGCCCTAGCTCTACGGCCGAGTGGTCCCCCAGCCTTCCGTCTCACCGGGATCGGACCTCCGGCGCCGGATAACTCCGATTACCTTCAAGAAGTCGGTTGGAAACTCGCTAAATTAGCCGAAACCATCAATGTCGAGTTCGAATACAGAGGATTCGTGGCGAATAGCTTGGCGGATCTGGACGCGTCGATGCTGGAGCTCCGACCGAGCGAGGTGGAGTCCGTGGTGGTAAACTCAGTTTTCGAGTTGCATAAGCTACTGGCTCGGCCGGGCGCCATCGAAAAGGTTATGTCGGTAGTGAAGCAGATGAAGCCGGAGATCATGACGGTGGTGGAGCAGGAAGCCAACCACAACGGTCCGGTTTTCATGGATCGGTTCACTGAGTCACTCCATTATTACTCGACGCTTTTTGACTCGTTGGAGAGCTCGCCCAACAACCAGGACAAGATGATGTCGGAAATGTACCTCGGAAAGCAAATTTGCAACGTGGTGGCTTGTGAAGGCAGCGACCGAGTGGAGCGGCACGAGACTCTGACTCAGTGGCGAACTCGGTTTTGCTCCTCTGGGTTCGAACCCATCCACCTGGGCTCCAATGCATTCAAGCAAGCAAGCATGCTCCTCGCCCTATTCGGCAGCGGAGAAGGATACCGAGTGGAAGAGAACAACGGATCTCTAACGCTGGGGTGGCACACCCGCCCCCTCATCGCCACCTCCGCCTGGAAACTCGGGAACAACTCGGTGGTGGTAACTCACTGA 1764 53.46 MKREHHHLHPGPEPPSMAAAPNGDTYLNTGKAKLWEEDAQLDGGMDELLAVLGYKVKSSDMAEVAQKLEQLEEAMCQVQDTGLSHLAFDTVHYNPSDLSTWLESMITELHPPPSFPQPPPSQMNDSSFLAPAESSTITSIDYDPQRQTSSLIFEESSSSDYDLKAITSSAIYSPRENKRLKPSSESDPDLFSTSAIGASDSATRPIVLVDSQENGIQLVHALMACAEAVQQNNLNLAEALVKRIGYLAVSQAGAMRKVATFFAEALARRIYRVCPENPLDHSMSDMLQLHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGIGPPAPDNSDYLQEVGWKLAKLAETINVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLARPGAIEKVMSVVKQMKPEIMTVVEQEANHNGPVFMDRFTESLHYYSTLFDSLESSPNNQDKMMSEMYLGKQICNVVACEGSDRVERHETLTQWRTRFCSSGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLTLGWHTRPLIATSAWKLGNNSVVVTH 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15723496 15725259 + Cp4.1LG01g18440.1 Cpe01g01843 463156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01843 587 MobiDBLite consensus disorder prediction 109 128 - -
Cpe01g01843 587 MobiDBLite consensus disorder prediction 1 24 - -
Cpe01g01843 587 PANTHER DELLA PROTEIN GAI1-RELATED 22 578 IPR030006 GO:0003712|GO:0005634
Cpe01g01843 587 Pfam GRAS domain family 218 577 IPR005202 -
Cpe01g01843 587 Coils Coil 54 74 - -
Cpe01g01843 587 MobiDBLite consensus disorder prediction 176 196 - -
Cpe01g01843 587 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 578 IPR005202 -
Cpe01g01843 587 Pfam Transcriptional regulator DELLA protein N terminal 46 113 IPR021914 -
Cpe01g01843 587 ProSiteProfiles GRAS family profile. 209 577 IPR005202 -
Cpe01g01843 587 SMART DELLA_2 46 119 - -
Cpe01g01843 587 Gene3D - 44 109 IPR038088 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01843 Cpe13g00364 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01843 Cpe-Chr1:15723496 Cpe01g01990 Cpe-Chr1:17007575 0 dispersed
Cpe12g00894 Cpe-Chr12:7758654 Cpe01g01843 Cpe-Chr1:15723496 2.80E-46 dispersed
Cpe01g01843 Cpe-Chr1:15723496 Cpe13g00364 Cpe-Chr13:3951163 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48895 PF03514 GRAS 1.40E-136 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01843 K14494 - csv:101204164 1050.81