Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe01g01844 | ATGGAACACTTCTTGGGTCTTCTCCGAATTCGGGTGCTGCGCGGTTCTAATCTGGCTGTTCGTGATACTCGTAGCAGTGATCCTTTTGTCGTCGTCACTATGGGCGATACGAGTTTGAAGACCCGTGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAACTGACTCTTTCTATTGCAGATCTTAGGACTCCAATCGGTTTATCAGTGTATGACAAAGACACAGTAACAGACCATGACAAAATGGGAGATGCCGTAATTGACATCGAACCATACATCGAATGTCTGAAGATGGGACTGGAAAGCCTCCCAGAGGGGTGTGTGGTTAAGAGGGTATATCCAAGCAGAACAAACGACTTAGCTGATGAGAGCCAATGTGTTTGGAACAAAGGGAAAATTATACAGAACATGCACCTTAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGAGATTCAGCTCGAATGGATTGATGTTCCGGGATCTAAGGGTCTGCCGAAAGAGGGTATGAGCCACTTCTAA | 522 | 45.21 | MEHFLGLLRIRVLRGSNLAVRDTRSSDPFVVVTMGDTSLKTRVVKNNCNPEWNDELTLSIADLRTPIGLSVYDKDTVTDHDKMGDAVIDIEPYIECLKMGLESLPEGCVVKRVYPSRTNDLADESQCVWNKGKIIQNMHLRLKNVECGEVEIQLEWIDVPGSKGLPKEGMSHF | 173 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 15729256 | 15731602 | - | Cp4.1LG01g18510.1 | Cpe01g01844 | 463157 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe01g01844 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 10 | 1 | 163 | - | - | |
| Cpe01g01844 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - | |
| Cpe01g01844 | 173 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
| Cpe01g01844 | 173 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
| Cpe01g01844 | 173 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 158 | IPR035892 | - | |
| Cpe01g01844 | 173 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Cpe01g01844 | 173 | Gene3D | C2 domain | 4 | 168 | IPR035892 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe01g01844 | Cpe04g01368 | CCT | |
| Cpe01g01844 | Cpe04g01368 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe01g01844 | Cpe-Chr1:15729256 | Cpe09g01112 | Cpe-Chr9:9578261 | 2.23E-72 | dispersed | |
| Cpe01g00045 | Cpe-Chr1:297361 | Cpe01g01844 | Cpe-Chr1:15729256 | 3.84E-79 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe01g01844 | - | - | csv:101204404 | 305.449 |