Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01844 ATGGAACACTTCTTGGGTCTTCTCCGAATTCGGGTGCTGCGCGGTTCTAATCTGGCTGTTCGTGATACTCGTAGCAGTGATCCTTTTGTCGTCGTCACTATGGGCGATACGAGTTTGAAGACCCGTGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAACTGACTCTTTCTATTGCAGATCTTAGGACTCCAATCGGTTTATCAGTGTATGACAAAGACACAGTAACAGACCATGACAAAATGGGAGATGCCGTAATTGACATCGAACCATACATCGAATGTCTGAAGATGGGACTGGAAAGCCTCCCAGAGGGGTGTGTGGTTAAGAGGGTATATCCAAGCAGAACAAACGACTTAGCTGATGAGAGCCAATGTGTTTGGAACAAAGGGAAAATTATACAGAACATGCACCTTAGGTTGAAGAATGTAGAGTGTGGTGAGGTGGAGATTCAGCTCGAATGGATTGATGTTCCGGGATCTAAGGGTCTGCCGAAAGAGGGTATGAGCCACTTCTAA 522 45.21 MEHFLGLLRIRVLRGSNLAVRDTRSSDPFVVVTMGDTSLKTRVVKNNCNPEWNDELTLSIADLRTPIGLSVYDKDTVTDHDKMGDAVIDIEPYIECLKMGLESLPEGCVVKRVYPSRTNDLADESQCVWNKGKIIQNMHLRLKNVECGEVEIQLEWIDVPGSKGLPKEGMSHF 173
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 15729256 15731602 - Cp4.1LG01g18510.1 Cpe01g01844 463157
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01844 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
Cpe01g01844 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Cpe01g01844 173 Pfam C2 domain 6 92 IPR000008 -
Cpe01g01844 173 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Cpe01g01844 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 158 IPR035892 -
Cpe01g01844 173 SMART C2_3c 7 102 IPR000008 -
Cpe01g01844 173 Gene3D C2 domain 4 168 IPR035892 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe01g01844 Cpe04g01368 CCT
Cpe01g01844 Cpe04g01368 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01844 Cpe-Chr1:15729256 Cpe09g01112 Cpe-Chr9:9578261 2.23E-72 dispersed
Cpe01g00045 Cpe-Chr1:297361 Cpe01g01844 Cpe-Chr1:15729256 3.84E-79 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01844 - - csv:101204404 305.449