Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01866 ATGGAAAGAATCCTCTCTACTTTGGCAATGATTTTTATCTTATTTGCTTTGGCTTCTTCAGCTGAACAAGAGGCTGTGAGTTCAATAAAAACTGATGCTGCAGCTCTTCTTAAGTTCAAGGACATGATTGACAAGGACCCAAATGGAGTGTTGTCCAGTTGGAAGCTTGAGAACAATCCATGTTCATGGTATGGAGTTTCATGCCAATCCGGAAGAGCAATTGCTCTTGATCTGAGTGGTTGTAATCTTGCAGGGAATGTTCATTTTGATCCTCTCTCTTCTCTGGATATGTTGTTGGCTTTGAATTTGTCTACAAATTCTTTCATTATAAACTCAACTACTTTGCTTCATCTTCCTTATAATTTGCAGCAACTTGAGCTCTCTCTTGCCAAAGTTGTAGGTAGTGTGCCAGAGAATCTTTTCTATAAGTGTCCAAATCTTATGTTTGTAGACCTTTCATTCAACAATCTTACAAGCTATCTGCCTGAAAATCTTCTGTTTAATGCTAATAAGCTTCAAGATCTTGATCTCTCCTACAACAATCTAACCGGGTCGATCTCAGGATTAAGAATATATGAGAATTCTTGCAGCTCTTTGTTGCGCATTGAGCTTTCGGGGAATCAAATTGTCGGTTCGATTCCGAGTGGTATTTCGAACTGCTCGAATCTGCAAACGCTTGGTATGTCAAACAATTTTCTCAGTGGGGATATCCCCAGATCTTTAGGGGAAATCAGCAGTTTACAGAGGGTGGATCTATCTCACAATCAGCTCACTGGTTGGCTTCCTTCTGATTGGAGAAATGCCTGCAATTCACTTCAAGAACTAAGGCTTAGCTACAACAACATTTCTGGTGCAATTCCAGCTTCCTTCTCTGCTTGTTCTTGGCTGCAAATTTTGGATCTTTCAAATAACAATCTATCTGGTCCTTTACCGGATTCCATCTTCAAGAATCTTGTCTCTTTACAAAGCCTGCTATTGAGTAATAACATTATCTCTGGATCATTGCCTTCATCCATATCTCACTGCAAGAATCTGCAGCTTGTAGACTTAAGTTCCAATAGAATTTCTGGATTGATCTCACCAGATATATGTCCAGGTGCTGAGTCACTTCAGGAACTGAAAATTCCAGACAATCTCATCGTAGGAGGAATCCCACCTGAGCTCTCACTGTGTCCACAGCTAAAGACAATTGATTTTAGTTTAAACTATCTGAAAGGCTCCATACCAGCAGAGCTTGGAAAGCTTCAGAATCTTGAACAGCTGATAGCATGGTTCAATGGTTTAGAAGGGAAAATACCTTCAGAATTGGGGAAATGTAGAAACTTGAAGGATCTTATACTTAATAACAATCATTTAAGTGGTGAAATCCCCACTGGATTGTTCAGTTGTAGCAATCTTGAATGGATTTCACTCACGAGTAATGAATTAACTGGTGAGATCCCAAAAGAATTTGGTCTTTTGCCAAGGCTGGCTGTCCTGCAACTTGGAAACAACAGTTTAAGTGGGCAGATACCAGCGGAGTTGGCAAACTGCAGCACTTTGGTTTGGTTGGATTTGAACAGCAATAAGCTTACAGGGGAAATACCACCTAGACTTGGCAGGCAGCTTGGAGCCAAATCATTGAATGGGATTCTTTCTGGAAACACTCTGGTGTTTGTTCGAAACGTCGGGAATTCGTGTAAAGGAGTCGGGGGCTTGTTAGAGTTTTCTGGAATCAGACCTGAAAGACTACAGCAAGAACCAACATTGAAGACCTGTGATTTCACTAGATTGTACTCTGGTCCAGTCCTCAGTTTGTTTACAAAGTACCAAACTTTGGAGTACTTGGATCTTTCTTACAATGAGCTTCGTGGGAGAATACCAGAAGAGTTCGGAGATATGGTTGCCTTACAGGTTCTAGAATTATCACACAACCAACTTTCTGGAGAGATTCCAGCATCGTTCGGTCGCCTAAAGAACTTAGGAGTGTTTGATGCATCATATAACAGACTGCAGGGTCATATTCCAGATTCATTTTCAAACTTATCATTCTTAGTGCAAATTGATCTATCTTATAATGAACTAACAGGGCGAATTCCATCAAGGGGGCAGCTCAGTACACTACCTGCAAGTCAGTATGCAAACAATCCAGGACTTTGTGGAGTTCCTTTGCCTGAATGCCAGAGTGAAGACCAGCCGGCGACAAGTCCTAATGTAGATGCTGGAAAAGGAAGAACAAAGCCAGAATCAGTGTCATGGGTTAATAGTATTGTTTTAGGTGTTCTTATTTCCATTGCCTGTGTGTGCATTTTGATTGTCTGGGCTATTGCCATGCGTGCAAGACGAAAAGAAGAAGAGGAAGTGAAGATGCTTAATAGTTTACAAGCAATACATGCCCCTACTACATGGAAAATTGACAAAGAGAAAGAGCCACTGAGTATCAATGTGGCAACTTTCCAAAGACAGCTAAGAAAGCTCAAGTTCTCCCAACTGATAGAAGCAACTAATGGCTTCTCAGCCGAAAGTCTCATTGGTAGTGGCGGGTTCGGTGAAGTGTTTAAAGCAACACTAAAGGATGGATCGAGCGTTGCAATCAAGAAACTGATACGTCTTAGTTGCCAGGGAGACCGTGAATTCATGGCGGAGATGGAAACCTTAGGAAAGATCAAACATGGAAATCTAGTACCTCTTCTGGGATACTGTAAAATAGGTGAGGAGAGGCTGCTAGTGTATGAGTTCATGAAGTTCGGTAGCCTAGAAGAGATGCTTCATGGAAGAGCAAAGATGCAAGATAGCAGAATTCTAACATGGGATGAAAGGAAAAAGATAGCCAGAGGTGCTGCTAAAGGACTCTGTTTCCTACACCATAACTGCATTCCACATATAATTCACAGAGACATGAAGTCCAGCAATGTACTTCTGGACCATGATTTAGACGCAAGAGTTTCAGATTTTGGAATGGCGAGGCTGATAAGTGCTCTTGACACCCATCTGAGTGTAAGCACACTTGCAGGCACTCCTGGTTATGTCCCTCCTGAGTACTACCAAAGCTTCAGGTGCACAGCAAAAGGCGACGTCTATTCGTTCGGTGTCGTCCTCTTAGAACTCTTGACAGGGAAACGACCAACTGATAAGGAGGATTTTGGGGACACCAATTTGGTGGGTTGGGTCAAAATGAAAGTCAATGATGGAAAACAAATGGAAGTGATAGATCCAGAGTTGCTTTCAGTGACCAAAACAAGTGACGAATCAGAAGCAGAAGAAGTTAAAGAAATGGTTAGATATTTGGAGATAACCCTTCGGTGTGTTGAAGAGTTTCCTTCCAAAAGGCCTAACATGTTGCAGGTGGTAGCCATGCTACGAGAGTTGATGCCTGGATCAACTAATGGAAGCAGCAACAGTGCTTGA 3387 41.87 MERILSTLAMIFILFALASSAEQEAVSSIKTDAAALLKFKDMIDKDPNGVLSSWKLENNPCSWYGVSCQSGRAIALDLSGCNLAGNVHFDPLSSLDMLLALNLSTNSFIINSTTLLHLPYNLQQLELSLAKVVGSVPENLFYKCPNLMFVDLSFNNLTSYLPENLLFNANKLQDLDLSYNNLTGSISGLRIYENSCSSLLRIELSGNQIVGSIPSGISNCSNLQTLGMSNNFLSGDIPRSLGEISSLQRVDLSHNQLTGWLPSDWRNACNSLQELRLSYNNISGAIPASFSACSWLQILDLSNNNLSGPLPDSIFKNLVSLQSLLLSNNIISGSLPSSISHCKNLQLVDLSSNRISGLISPDICPGAESLQELKIPDNLIVGGIPPELSLCPQLKTIDFSLNYLKGSIPAELGKLQNLEQLIAWFNGLEGKIPSELGKCRNLKDLILNNNHLSGEIPTGLFSCSNLEWISLTSNELTGEIPKEFGLLPRLAVLQLGNNSLSGQIPAELANCSTLVWLDLNSNKLTGEIPPRLGRQLGAKSLNGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLQQEPTLKTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPASFGRLKNLGVFDASYNRLQGHIPDSFSNLSFLVQIDLSYNELTGRIPSRGQLSTLPASQYANNPGLCGVPLPECQSEDQPATSPNVDAGKGRTKPESVSWVNSIVLGVLISIACVCILIVWAIAMRARRKEEEEVKMLNSLQAIHAPTTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGSGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHGNLVPLLGYCKIGEERLLVYEFMKFGSLEEMLHGRAKMQDSRILTWDERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHDLDARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKEDFGDTNLVGWVKMKVNDGKQMEVIDPELLSVTKTSDESEAEEVKEMVRYLEITLRCVEEFPSKRPNMLQVVAMLRELMPGSTNGSSNSA 1128
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15984614 15988000 - Cp4.1LG01g18640.1 Cpe01g01866 463179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01866 1128 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 17 1117 - -
Cpe01g01866 1128 Gene3D Transferase(Phosphotransferase) domain 1 907 1126 - -
Cpe01g01866 1128 SUPERFAMILY Protein kinase-like (PK-like) 812 1113 IPR011009 -
Cpe01g01866 1128 SMART serkin_6 831 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01866 1128 SUPERFAMILY L domain-like 31 263 - -
Cpe01g01866 1128 Gene3D - 545 601 - -
Cpe01g01866 1128 Pfam Brassinosteroid receptor island domain 542 600 IPR045381 -
Cpe01g01866 1128 ProSitePatterns Protein kinases ATP-binding region signature. 837 860 IPR017441 GO:0005524
Cpe01g01866 1128 Gene3D Phosphorylase Kinase; domain 1 792 906 - -
Cpe01g01866 1128 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 17 1117 - -
Cpe01g01866 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 955 967 IPR008271 GO:0004672|GO:0006468
Cpe01g01866 1128 PRINTS Leucine-rich repeat signature 172 185 - -
Cpe01g01866 1128 PRINTS Leucine-rich repeat signature 244 257 - -
Cpe01g01866 1128 Pfam BspA type Leucine rich repeat region (6 copies) 131 231 IPR026906 -
Cpe01g01866 1128 ProSiteProfiles Protein kinase domain profile. 831 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01866 1128 MobiDBLite consensus disorder prediction 717 738 - -
Cpe01g01866 1128 Gene3D Ribonuclease Inhibitor 169 720 IPR032675 -
Cpe01g01866 1128 SUPERFAMILY L domain-like 583 716 - -
Cpe01g01866 1128 CDD STKc_IRAK 837 1116 - -
Cpe01g01866 1128 ProSiteProfiles Leucine-rich repeat profile. 171 193 IPR001611 GO:0005515
Cpe01g01866 1128 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Cpe01g01866 1128 SUPERFAMILY RNI-like 202 531 - -
Cpe01g01866 1128 Pfam Leucine rich repeat 440 500 IPR001611 GO:0005515
Cpe01g01866 1128 Pfam Leucine rich repeat 599 640 IPR001611 GO:0005515
Cpe01g01866 1128 Pfam Leucine rich repeat 271 329 IPR001611 GO:0005515
Cpe01g01866 1128 Pfam Protein kinase domain 833 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g01866 1128 Gene3D Ribonuclease Inhibitor 31 141 IPR032675 -
Cpe01g01866 1128 SMART LRR_typ_2 144 168 IPR003591 -
Cpe01g01866 1128 SMART LRR_typ_2 439 463 IPR003591 -
Cpe01g01866 1128 SMART LRR_typ_2 318 342 IPR003591 -
Cpe01g01866 1128 SMART LRR_typ_2 487 511 IPR003591 -
Cpe01g01866 1128 SMART LRR_typ_2 296 317 IPR003591 -
Cpe01g01866 1128 SMART LRR_typ_2 269 292 IPR003591 -
Cpe01g01866 1128 SMART LRR_typ_2 627 651 IPR003591 -
Cpe01g01866 1128 SMART LRR_typ_2 244 267 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01866 Cpe-Chr1:15984614 Cpe19g00558 Cpe-Chr19:4712113 0 dispersed
Cpe15g00542 Cpe-Chr15:6275604 Cpe01g01866 Cpe-Chr1:15984614 7.60E-19 dispersed
Cpe20g00468 Cpe-Chr20:2708293 Cpe01g01866 Cpe-Chr1:15984614 6.39E-06 dispersed
Cpe20g00568 Cpe-Chr20:3385919 Cpe01g01866 Cpe-Chr1:15984614 1.41E-74 dispersed
Cpe01g00002 Cpe-Chr1:9434 Cpe01g01866 Cpe-Chr1:15984614 9.12E-146 transposed
Cpe01g00889 Cpe-Chr1:5243696 Cpe01g01866 Cpe-Chr1:15984614 1.96E-77 transposed
Cpe13g00450 Cpe-Chr13:4819258 Cpe01g01866 Cpe-Chr1:15984614 2.18E-71 transposed
Cpe14g00338 Cpe-Chr14:2063042 Cpe01g01866 Cpe-Chr1:15984614 2.84E-154 transposed
Cpe01g01866 Cpe-Chr1:15984614 Cpe13g00437 Cpe-Chr13:4702710 3.93E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62166 PF00069 Pkinase 1.40E-43 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01866 - - csv:101208987 2049.25