Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g01903 | ATGTTGAGTTCAGCAAGCAGCACAGCAATAAAAGCTGCTCCTTTTTTCTTCTTGTCATTTGATGAACCTACAGCAGCAAGTTTAATGGAAATTAGGAGAAAAAGTGGGTTACTGTCTTGCTTGGCTTTGGTTTGGTTATGGGCTTCTGCAACTGCAACTTCAACGGGCATTCGTTTAAACGTTGAAGTTCAAGCTTTGATGGGAATCAAAGCTGGTTTGAAGGATCCTCATTCTGTTCTAGCTTGGGATGAAAATGCTGTGGATCCATGCACTTGGAATTTAATCACTTGCTCTCCTGATAAACTTGTGATTGGCATAGGAGCTCCAAGCCAAAACTTTTCTGGGACACTCTCACCAAGTATTGGAAATTTGACAAACCTTCAATTTTTGCTTCTTCAGAATAATTATATATCAGGAAAAGTTCCTAACGAGATTAGCAAGATACCGAAACTTCACACACTTGATCTTTCAAACAACTTGTTTTCTGGTGAAGTTCCTAGCTCTTTCTCCAATTTGAAGAGCCTCCAATACCTGAGACTCAACAATAACACCTTCTCTGGGACAATCCCATCATCACTGGCTAACATGAACCAGCTTGCCTTGCTGGATCTGTCCTATAATAATTTGAGCGGTCCTCTGCCCAGATTGTTGGCTAAGACATATAACTTTACTGGAAATTCTTTGATTTGTGCCCCTGGCTCTAAGGAAGTATGCTACGGAACAACTCCATTGCCACTTTCTTTTGCTGTCACTAATTCCACATACTCCCAACCTCCTAGGAGACATAAAGGCCAGAGAATTGCTCTAGTCATTGGCCTCAGCTTGGCCTGCATCTGTCTGTTAACTCTTGCATATGGTTTCTTTATCTGGCGGAAGCATAGGCGCAACCAGCAAATATTCTTCGAAACTAATGATCGGCACCATGAAGAACTTAGCCTTGGAAACATAAAGAGGTTTCAGTTCAAAGAACTTCGGAACGCCACTCACAATTTCAGCAGTAAAAACTTGATTGGAAAAGGTGGATTTGGAAATGTTTACAGAGGATATCTACAAGATGGCACCATTATAGCTGTCAAGAGACTCAAAGATGGGAATGCTATGAGAGGAGAGACCCAATTTCAGACTGAAGTGGAGATGATAAGCTTGGCAGTGCATAGAAACCTCCTCAAGCTGTATGGTTTCTGTATGACAGAAACTGAGAGGCTTTTGGTCTATCCATATATGTCTAATGGCAGTGTTGCTACTCGTCTTAAAGCAAAACCAGCTCTGGATTGGGGTACAAGGAAGAGAATTGCCTTGGGAGCTGCAAGGGGCTTGTTATACTTACATGAGCAGTGTGATCCAAAAATAATTCACAGAGATGTGAAAGCTGCAAATATACTGCTTGATGATTTCTGCGAGGCAGTAGTCGGTGATTTTGGGCTCGCAAAGCTACTAGATCACAGTGATTCACATGTCACTACTGCTGTGAGAGGAACTGTTGGGCACATTGCACCAGAGTATCTGTCAACCGGCCAATCCTCAGAGAAAACTGATGTTTTCGGGTTTGGAATTCTATTACTTGAGCTTGTATCAGGTCAAAGAGCTCTTGAATTTGGAAAAGCAGCAAACCAAAAGGGTGCCATACTAGACTGGATAAAGAAGCTACACCAAGAAAAGAAGTTAGAAATGCTTGTTGACAAAGACTTGAGAAGCAATTATGACCCAATAGAAATTGAAGAAATTGTTCGAGTAGCTCTCTTGTGCATCCAATATCTTCCAAGCAATAGGCCAAAGATGTCTGAAGTGGTCAGGATGCTTGAAGGAGATGGGCTTGCAGAGAAATGGGAAGCTTCCCAAAGAGCAGAAGCAAGCAGGGTGAGAGCCAATGAGTTCTCCTCTTCAGAACGTTACTCTGATCTTACTGACGACGCTTCATTGTTTGCTCAAGCAATAGAGCTCTCAGGACCAAGATAA | 1956 | 42.23 | MLSSASSTAIKAAPFFFLSFDEPTAASLMEIRRKSGLLSCLALVWLWASATATSTGIRLNVEVQALMGIKAGLKDPHSVLAWDENAVDPCTWNLITCSPDKLVIGIGAPSQNFSGTLSPSIGNLTNLQFLLLQNNYISGKVPNEISKIPKLHTLDLSNNLFSGEVPSSFSNLKSLQYLRLNNNTFSGTIPSSLANMNQLALLDLSYNNLSGPLPRLLAKTYNFTGNSLICAPGSKEVCYGTTPLPLSFAVTNSTYSQPPRRHKGQRIALVIGLSLACICLLTLAYGFFIWRKHRRNQQIFFETNDRHHEELSLGNIKRFQFKELRNATHNFSSKNLIGKGGFGNVYRGYLQDGTIIAVKRLKDGNAMRGETQFQTEVEMISLAVHRNLLKLYGFCMTETERLLVYPYMSNGSVATRLKAKPALDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDFCEAVVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELVSGQRALEFGKAANQKGAILDWIKKLHQEKKLEMLVDKDLRSNYDPIEIEEIVRVALLCIQYLPSNRPKMSEVVRMLEGDGLAEKWEASQRAEASRVRANEFSSSERYSDLTDDASLFAQAIELSGPR | 651 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 16231976 | 16236544 | - | Cp4.1LG01g19060.1 | Cpe01g01903 | 463216 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g01903 | 651 | Pfam | Leucine rich repeat | 149 | 209 | IPR001611 | GO:0005515 | |
Cpe01g01903 | 651 | SUPERFAMILY | Protein kinase-like (PK-like) | 309 | 601 | IPR011009 | - | |
Cpe01g01903 | 651 | Gene3D | Ribonuclease Inhibitor | 59 | 240 | IPR032675 | - | |
Cpe01g01903 | 651 | Pfam | Leucine rich repeat N-terminal domain | 60 | 98 | IPR013210 | - | |
Cpe01g01903 | 651 | SUPERFAMILY | L domain-like | 62 | 228 | - | - | |
Cpe01g01903 | 651 | ProSitePatterns | Protein kinases ATP-binding region signature. | 337 | 359 | IPR017441 | GO:0005524 | |
Cpe01g01903 | 651 | SMART | serkin_6 | 331 | 600 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g01903 | 651 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 34 | 651 | - | - | |
Cpe01g01903 | 651 | ProSiteProfiles | Protein kinase domain profile. | 331 | 610 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g01903 | 651 | Pfam | Protein kinase domain | 332 | 598 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe01g01903 | 651 | Gene3D | Transferase(Phosphotransferase) domain 1 | 408 | 620 | - | - | |
Cpe01g01903 | 651 | PANTHER | PROTEIN NSP-INTERACTING KINASE 2-LIKE | 34 | 651 | - | - | |
Cpe01g01903 | 651 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 450 | 462 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe01g01903 | 651 | Gene3D | Phosphorylase Kinase; domain 1 | 300 | 407 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01903 | Cpe-Chr1:16231976 | Cpe01g02453 | Cpe-Chr1:20327024 | 0 | dispersed | |
Cpe16g00667 | Cpe-Chr16:6989639 | Cpe01g01903 | Cpe-Chr1:16231976 | 6.30E-42 | dispersed | |
Cpe01g01903 | Cpe-Chr1:16231976 | Cpe09g00254 | Cpe-Chr9:1462093 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62167 | PF00069 | Pkinase | 1.50E-44 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g01903 | - | - | csv:101222667 | 1099.35 |