Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01920 ATGCCAGACGTGCAAGCTCTTGTGAATGATTTCGTTATCAAGCTTAAGAAGCGTAAAATTGAGGGCTCTTTGGCCACCGCGAAGCATACAGCTGAATTGCTTCGTTCTGTCATTTCCCAGCAGCGAATACCCTACACGAATCAGGCCGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGAGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGTGTTTTGCACATTATTAGGGAGGAGGATCTCTCTCTCACCACAGCTTCAATTGCTGGGTTGAATTTAGCAGCTGTTAGTGATGATGAAGATGACAATGAAAAAGATGATCGCCCGGTCCTCTCAGCCGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGACCACCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAACCAAGCATCTGTTCATCAAACTTCTTCATCTGGAGGTGATTCAGAAGGAAAGAGCAAATCTGCTGATAAAAGTTCAAGGAGTCGGAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAACTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAGCAAGCAGTGGAACACATTCATCAAAACGAGGTAATATTAACTCTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTGCTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCCATGATCTCTCGGGTGAATATGGTAATAGTTGGCGCTCATGCTGTCATGGCAAATGGTGGTGTCATAGCACCTGTTGGATTGAATATGTTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTTGTACTAGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCTGAAGTTCTACTCAATGAACTGAGATCCCCATCAGAGCTACTGGACTTCGGTGAATTTTCAGATTGTATGGACTTCGGAACTAACACTGGTTCTCCTCTTCTTCACGTAGTTAACCCTACATTTGACTATGTGCCGCCAGCACTCGTTAGTTTATTTATTACTGACACAGGCGGCCATAACTCATCATACATGTATCGGCTTATTTCTGATTATTATTCAGCTGATGATTTGGTAATTAAACGAAGGCTTTCTACAGGGAGCTGA 1254 43.94 MPDVQALVNDFVIKLKKRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLNLAAVSDDEDDNEKDDRPVLSAAAVAAAARSTLRPPSLQTLLEDVPNQASVHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMLALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNTGSPLLHVVNPTFDYVPPALVSLFITDTGGHNSSYMYRLISDYYSADDLVIKRRLSTGS 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16372713 16380453 - Cp4.1LG01g19180.1 Cpe01g01920 463233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01920 417 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 54 409 - -
Cpe01g01920 417 Gene3D - 194 401 IPR042529 -
Cpe01g01920 417 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Cpe01g01920 417 MobiDBLite consensus disorder prediction 143 161 - -
Cpe01g01920 417 PANTHER BNAA01G32370D PROTEIN 54 409 - -
Cpe01g01920 417 MobiDBLite consensus disorder prediction 143 176 - -
Cpe01g01920 417 MobiDBLite consensus disorder prediction 162 176 - -
Cpe01g01920 417 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 406 IPR037171 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01920 Cpe-Chr1:16372713 Cpe18g00739 Cpe-Chr18:7184511 9.88E-19 dispersed
Cpe17g00426 Cpe-Chr17:3191706 Cpe01g01920 Cpe-Chr1:16372713 3.48E-22 transposed
Cpe01g01920 Cpe-Chr1:16372713 Cpe13g00487 Cpe-Chr13:5035859 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01920 K03754 - csv:101220366 742.651