Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01926 ATGGCGCTCTCTGATAGACCCTCTCGTCAATCTCTGATCCCCAGCTTCCTTTATTCTTCACCTTCTTCCACTCGCACTCTGCCTATTAAGAAGATGCTTCAGTCTTCATCCACTTTTGATGCGGTTTCCTCTTCTCCTAAGACCTTTGTTATTCCTGCCCCGAGTGAGCCGTCTAAGAAGATTGAGTTGTACTCGCCGGCGTTCTACGCTGCTTGTACTTTTGGTGGGATTCTCAGCTGTGGTCTCACGCATATGACTGTTACTCCTCTCGATTTGGTTAAATGCAATATGCAGATCGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTTGGAATTTTGCTTAAGGAGCAGGGTGTGAGGGGTTTCTTTAGGGGTTGGGTGCCTACCCTTCTTGGCTACAGTGCTCAGGGTGCTTGCAAGTTTGGTTTCTACGAGTTCTTTAAGAAGTATTACACTGATATTGCTGGACCTGAGTACGCTGCTAAGTACAAGACCTTGATCTACCTTGCTGGCTCTGCATCGGCTGAGGTGATTGCTGATGTTGCACTTTGCCCTTTCGAAGCAGTCAAGGTTCGGGTTCAAACTCAGCCTGGATTTGCTAGAGGGCTAGCGGATGGACTTCCCAAGTTTGTCAAATCTGAAGGAACTCTAGGGTTGTACAAGGGTATTGTTCCACTCTGGGGTCGCCAGATTCCATACACAATGATGAAGTTTGCTTCCTTCGAGACAATTGTCGAGATGATATACAAGTATGCCGTTCCCGCACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTATTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTGTCTCATCCTGCTGATAATCTCGTGTCTTTCCTCAACAATGCCAAAGGAGCAACTGTTGGAGACGCTGTCAAGAAGCTCGGATTATGGGGTCTCTTCACTCGTGGTCTACCCCTCCGTATCGTCATGATTGGAACTCTTACTGGTGCTCAATGGGGCATTTACGATGCATTCAAAGTGTTCGTTGGACTGCCTACTACTGGTGGTGTTGCTCCTGCTGCCCCCACACCTTCTGCTTCTGAGCTTGCAAATGCGTGA 1107 47.88 MALSDRPSRQSLIPSFLYSSPSSTRTLPIKKMLQSSSTFDAVSSSPKTFVIPAPSEPSKKIELYSPAFYAACTFGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGILLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYTDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVEMIYKYAVPAPKDQCSKSLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAPTPSASELANA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16408764 16412477 - Cp4.1LG01g19310.1 Cpe01g01926 463239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01926 368 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 361 - -
Cpe01g01926 368 Pfam Mitochondrial carrier protein 168 252 IPR018108 -
Cpe01g01926 368 Pfam Mitochondrial carrier protein 70 153 IPR018108 -
Cpe01g01926 368 Gene3D Mitochondrial carrier domain 161 346 IPR023395 -
Cpe01g01926 368 Gene3D Mitochondrial carrier domain 11 160 IPR023395 -
Cpe01g01926 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 361 IPR044677 GO:0005315|GO:1990547
Cpe01g01926 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Cpe01g01926 368 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
Cpe01g01926 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Cpe01g01926 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01926 Cpe13g00493 CCT
Cpe01g01926 Cpe13g00493 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01926 Cpe-Chr1:16408764 Cpe18g00933 Cpe-Chr18:8237124 0 dispersed
Cpe01g01926 Cpe-Chr1:16408764 Cpe13g00493 Cpe-Chr13:5069505 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01926 K15102 - csv:101221771 690.263