Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01956 ATGGCGAGCCGATACTGGATGGTCTCTTTACCCGTTCAAGGCTCCGCTTCTTCCCTATGGAATCGTCTCCAAGAACAAATCTCCAAGCACTCTTTCGATACTCCTCTTTACAGATTCAATATTCCTAATCTCCGCGTTGGAACGCTGGATTCGCTCCTTTCCCTTAGCGATGATCTCCTGAAGTCGAACAGCTTTGTGGAAGGAGTTTCCCAAAAGATCAGACGGCAGATCGAGGAACTGGAGAAGGTTTCTGGTGTGGAAAGCCACGGCTTGACGGTTGATGGAGTCCCCGTTGATTCGTACCTTACTAGGTTTGTGTGGGATGAAGCCAAGTACCCAACAATGTCGCCTCTGAGAGATATTGTGGATAGCATTCACACTCAAGTGGCCAAGATTGAGGATGACCTCAAGATTCGGGTTGCTGAGTACAATAACGTGCGGAGTCAACTTAATGCCATTAACAGAAAGCAAAGTGGAAGCTTGGCAGTCCGTGATATTTCCAATCTTGTAAAACCAGAGGACATAATTACCTCAGAACATCTTGAAACCCTTCTTGTGATTGTTCCCAAGTACTCACAGAAAGAATGGCTATCTAGCTATGAAACACTGACTAGCTATGTGGTTCCCAGGTCTTCCAAGAAGTTATACGAGGATAACGAATATGCCCTTTACACTGTAACACTCTTTAGTCGCGTTGCAGACAATTTCAAAACAAGCGGACGTGAAAAAGGGTTCCAGATTCGTGAATTTGAATATAGTCCAGAAGCACAGGAGAGTAGAAAACTGGAGTTAGAAAAGTTGGTGCAGGACCAGGAAAGTATGAGAAGTTCTTTATTGCAGTGGTCCTACGCTAGTTATGCTGAGGTCTTCATTTCCTGGATGCACTTTTGCGCTGTACGTGTCTTTGCTGAGAGTATCCTGAGATATGGTTTACCACCATCCTTCTTGGCATCTGTTTTGGCACCATCTGTTAAAAGTGAGAAGAAAGTTAGGTCAATCCTTGAAGGTTTGTGCGACAGTGCTAACAGTACATATTGGAAAACTGAAGATGAAGTGGGAGCAGGGATGGCTGGTCTTGGAGGAGAATCTGATGCACACCCATATGTGTCCTTCACAATCAATCTTGCCTAA 1131 44.83 MASRYWMVSLPVQGSASSLWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLLKSNSFVEGVSQKIRRQIEELEKVSGVESHGLTVDGVPVDSYLTRFVWDEAKYPTMSPLRDIVDSIHTQVAKIEDDLKIRVAEYNNVRSQLNAINRKQSGSLAVRDISNLVKPEDIITSEHLETLLVIVPKYSQKEWLSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFSRVADNFKTSGREKGFQIREFEYSPEAQESRKLELEKLVQDQESMRSSLLQWSYASYAEVFISWMHFCAVRVFAESILRYGLPPSFLASVLAPSVKSEKKVRSILEGLCDSANSTYWKTEDEVGAGMAGLGGESDAHPYVSFTINLA 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16698528 16702842 - Cp4.1LG01g19540.1 Cpe01g01956 463269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01956 376 SUPERFAMILY Vacuolar ATP synthase subunit C 2 375 IPR036132 GO:0015078|GO:0033180|GO:1902600
Cpe01g01956 376 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 - -
Cpe01g01956 376 Pfam V-ATPase subunit C 5 369 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cpe01g01956 376 Gene3D Vacuolar atp synthase subunit c; domain 1 5 334 - -
Cpe01g01956 376 Gene3D - 41 312 - -
Cpe01g01956 376 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 376 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cpe01g01956 376 CDD V-ATPase_C 5 373 IPR004907 GO:0033180|GO:0046961|GO:1902600
Cpe01g01956 376 Gene3D - 163 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01956 Cpe-Chr1:16698528 Cpe13g00520 Cpe-Chr13:5316513 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01956 K02148 - csv:101221574 707.212