Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01970 ATGAGGGTTAAGATTGCTTTGAATGAGAAGGGCGTGAGCTATGAGAGCAAAGAAGAGGACTTGTTTGGTTGGAAAGGTGGCAAAAGTGAGCTATTACTCAAATCTAACCCTATCCATAAGAAAGTCCCTGTTCTCTTGCATAATGGTAACCCACTTAATGAAAGCTCCAACATTGTCACCTATATTGACGAGACATGGCCTTCTTCTTCCCCTCTTCTTCCATCTTCCCCCTATGAAAGAGCTCGAGCTCGCTTCTGGATCGACTACATCGACAAAAAGGTTTTCGAGACGGGTGGCAAGATTTGGAGGAGTAATGGAGATGAACAAGAGGTAGCCAAGAAGGAGTTCATTGAGATTTTGAAGCAATTGGAGGAAGCTTTAGGGGATAATGATTTCTTTGGAGGAGAAAGGTTTGGGATTGTGGATGTGATTGCTATCCCTTTCAGTTGTTGGTTCTATGCTTTTGAGAAAGTTGGGGGCTTTAAAGTGGAAGAACATTGCCCAAAGCTATCAAATTGGGAGAAGAGGTGCTTGTTGAAGGAGAGTGTGGGTAGTGTCATTCCTAGCCCTGAGATGGTGTATGGGTTTGTGAGCTCCATGAGGAACAAGCTTGGGCTTGAATAG 624 44.07 MRVKIALNEKGVSYESKEEDLFGWKGGKSELLLKSNPIHKKVPVLLHNGNPLNESSNIVTYIDETWPSSSPLLPSSPYERARARFWIDYIDKKVFETGGKIWRSNGDEQEVAKKEFIEILKQLEEALGDNDFFGGERFGIVDVIAIPFSCWFYAFEKVGGFKVEEHCPKLSNWEKRCLLKESVGSVIPSPEMVYGFVSSMRNKLGLE 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16862570 16863270 - Cp4.1LG01g19720.1 Cpe01g01970 463283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01970 207 Gene3D - 76 207 - -
Cpe01g01970 207 SUPERFAMILY GST C-terminal domain-like 64 203 IPR036282 -
Cpe01g01970 207 Pfam Glutathione S-transferase, N-terminal domain 1 64 IPR004045 -
Cpe01g01970 207 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 199 IPR045073 -
Cpe01g01970 207 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 76 196 IPR010987 -
Cpe01g01970 207 Gene3D Glutaredoxin 1 75 - -
Cpe01g01970 207 SFLD Main.3: Omega- and Tau-like 1 204 IPR045073 -
Cpe01g01970 207 Pfam Glutathione S-transferase, C-terminal domain 105 177 IPR004046 -
Cpe01g01970 207 SUPERFAMILY Thioredoxin-like 1 94 IPR036249 -
Cpe01g01970 207 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 199 - -
Cpe01g01970 207 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 70 IPR004045 -
Cpe01g01970 207 CDD GST_C_Tau 78 197 IPR045074 GO:0004364|GO:0006749
Cpe01g01970 207 SFLD Glutathione Transferase (cytosolic) 1 204 IPR040079 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01970 Cpe-Chr1:16862570 Cpe14g00390 Cpe-Chr14:2406631 1.96E-52 dispersed
Cpe01g01970 Cpe-Chr1:16862570 Cpe01g00578 Cpe-Chr1:3332404 4.94E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01970 K00799 - csv:101213628 347.821