Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g01990 ATGAAGATGAAGATGAAGAGGGAGCTTGAGGATGATAGATCTACTGGTGGTGGTGTTTACGGCGGCGGAAGGCAGGGGGTTGGGAAAGGGGAGTGTTCTTCAGTGTTGAGTGGGAAAGTGAAGATGTGGGAGGAGGAGGAGGAGCAAGAGGTCGGCGGCGGAGGAATGGATGAGTTGCTTGCTGTTTTGGGCTATAAGGTTAGAGCGTCGGACATGGCGGATGTGGCGCAGAAGATGGAGCAACTGGAGATGGTGATGGGATCTGTTAAGGAAGATGGGATTTCTCATCTGGCTTCTGATACTGTTCATTATAATCCTTCTGATCTCTCTGCTTGGATTCAAAATATGCTCTCTGAATTCAATAATACACCCAACCATTTCAACTCTTCTTCTATTTCTACTCCTCCTCCTCAATCTTCTCAATATTCCAATCCTCACTCACGGATTCAATCCAGGCCTTCGCGGTTGTACGACGACGATTCTGAGTACGATCTCAGCGCCATTCCTGGCGTAGCGGTTTTTCCCTCCAAAGATTCCTCAACAGAAATCGAAACTAATTCTCGCAAGCGAGTGAAAATTGAAGGAGAGAGTTCGGTGAATTTGTTGCCGCCATCGCCACCGTTTGTTGCTGCTGCGGCAGCGGCCGGGATTGTCTCTGAACCTTCTCGGCCGGTGGTGGTTGTGGAGGAGGGCTCGCAAGACGCAGGGATTCAACTCGTTCACACTCTAATGGCCTGCGCCGAGGCCGTGCAGCAAGAGAACATGAAGATCGCTGAGGCATTGGTGAAGCACATCGGATTACTAGCGGTATCGCAAGCCGGAGCGATGAGGAAAGTCGCGACGTATTTTGCCGAAGCCCTAGCTCGTCGGATTTACAGAATCTACTCTCCTCAAGACGGATTTTACTCTTCATACGCCGATATCCTCCAGATGCACTTTTACGAGACCTGTCCGTATCTGAAATTCGCGCATTTCACTGCGAATCAAGCGATTCTCGAAGCATTCGCGTCGGCATCGAGAGTTCATGTCATCGATTTCAGTCTCAATCAAGGTATGCAATGGCCGGCGCTGATGCAAGCGCTCGCATTACGGCCAGGAGGTCCGCCGACGTTTCGATTGACTGGAATCGGCCCGCCGAAGCAAGGTAATACAGCCGATTCGTTGCAGCAAGTCGGTTGGAAGTTAGCACAGATGGCGGAGGCCATTGGTGTGGAGTTTGAGTTCAATCAAATCGTGTGTAGTAACCTAGCTAATCTCAATCCGGCGGCACTGGAGATTCGGCCGCCGGCGGTGGAGGCTGTGGCGGTGAATTCGGTGTTCGATCTCCACCGGTTACTGGCTCGGCCTGGAGCGATCGAGAAGGTTTTGGGATCGATAAAAGCAACGAAGCCGAAGATCGTGACGATTGTAGAACAAGAAGCAAACCACAACGGGAGGGTTTTCATGGACCGGTTCACCGAGGCGTTACATTATTACTCAAACATGTTTGACTCGCTCGAGGTTTCCTCGACCGGGTTTGAACCGGCAAGTGAGGACGTATTGTTGTCTGAAGTTTATTTAGGAAGGCAGATTTGTAATGTGGTGGCTTGTGAAGGACCAGACCGAGTCGAACGGCACGAGTCGTTAACTCATTGGCGAACTCGGATGGAATCAGCTGGGTTCAACCCGGTTCATCTCGGTTCGAACGCGTTTAAGCAAGCTAGCATGCTTTTGGCCCTCTTTGCTGGAGGAGAGGGGTACCGAGTGGAAGAGAATAATGGGTGTTTGATGCTTGGCTGGCACACTCAACCGTTGATCGCCACGTCAGCTTGGCAGCTCGACGCCGATGAGTCGACCCAGTGA 1842 51.47 MKMKMKRELEDDRSTGGGVYGGGRQGVGKGECSSVLSGKVKMWEEEEEQEVGGGGMDELLAVLGYKVRASDMADVAQKMEQLEMVMGSVKEDGISHLASDTVHYNPSDLSAWIQNMLSEFNNTPNHFNSSSISTPPPQSSQYSNPHSRIQSRPSRLYDDDSEYDLSAIPGVAVFPSKDSSTEIETNSRKRVKIEGESSVNLLPPSPPFVAAAAAAGIVSEPSRPVVVVEEGSQDAGIQLVHTLMACAEAVQQENMKIAEALVKHIGLLAVSQAGAMRKVATYFAEALARRIYRIYSPQDGFYSSYADILQMHFYETCPYLKFAHFTANQAILEAFASASRVHVIDFSLNQGMQWPALMQALALRPGGPPTFRLTGIGPPKQGNTADSLQQVGWKLAQMAEAIGVEFEFNQIVCSNLANLNPAALEIRPPAVEAVAVNSVFDLHRLLARPGAIEKVLGSIKATKPKIVTIVEQEANHNGRVFMDRFTEALHYYSNMFDSLEVSSTGFEPASEDVLLSEVYLGRQICNVVACEGPDRVERHESLTHWRTRMESAGFNPVHLGSNAFKQASMLLALFAGGEGYRVEENNGCLMLGWHTQPLIATSAWQLDADESTQ 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17007575 17009416 + Cp4.1LG01g19930.1 Cpe01g01990 463303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g01990 613 MobiDBLite consensus disorder prediction 124 151 - -
Cpe01g01990 613 MobiDBLite consensus disorder prediction 1 25 - -
Cpe01g01990 613 Pfam GRAS domain family 239 605 IPR005202 -
Cpe01g01990 613 Gene3D - 55 120 IPR038088 -
Cpe01g01990 613 SMART DELLA_2 57 130 - -
Cpe01g01990 613 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 34 606 IPR005202 -
Cpe01g01990 613 MobiDBLite consensus disorder prediction 124 160 - -
Cpe01g01990 613 ProSiteProfiles GRAS family profile. 230 605 IPR005202 -
Cpe01g01990 613 Pfam Transcriptional regulator DELLA protein N terminal 57 124 IPR021914 -
Cpe01g01990 613 PANTHER DELLA PROTEIN GAI1-RELATED 34 606 IPR030006 GO:0003712|GO:0005634
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g01990 Cpe03g00709 CCT
Cpe01g01990 Cpe02g01442 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01843 Cpe-Chr1:15723496 Cpe01g01990 Cpe-Chr1:17007575 0 dispersed
Cpe01g01990 Cpe-Chr1:17007575 Cpe13g00364 Cpe-Chr13:3951163 0 dispersed
Cpe04g01595 Cpe-Chr4:12417493 Cpe01g01990 Cpe-Chr1:17007575 1.04E-64 dispersed
Cpe19g00183 Cpe-Chr19:1489557 Cpe01g01990 Cpe-Chr1:17007575 7.07E-70 dispersed
Cpe01g02589 Cpe-Chr1:21009953 Cpe01g01990 Cpe-Chr1:17007575 1.94E-101 transposed
Cpe01g01990 Cpe-Chr1:17007575 Cpe13g00557 Cpe-Chr13:5583519 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48912 PF03514 GRAS 2.30E-135 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g01990 K14494 - csv:101213911 923.694