Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02010 ATGACGAACACAATAAAAGGCAAAACCAGAGAGCTCACAGATTCTCCCAGACACTTCAAACCACCCTCTCTCATGGGTTCTTTGCCTTCTGACACTCTCGCCGTCGAAATGGCCGACACCCATGTTCTCGCCGGCGCCGGCGACGGAGCAGAGACCACCGAATGGCTCCTCAATTCTCCCAACCCTCCAAGTTTCTGGGAAGAACTTGCCGCCGCTGTCAGAGAAAATGTCATTCCACGAAGCTGCACAAAGACCCATTTGGCAAAGAAGAAAACGAAAACCACTTCTTCAAGCGATGAAAAACAGAGCATTTTTAAAGCCACTCTGATTCTTCTGCAGAGCATGTTCCCAATCCTCAAATTGGGCCGAAACTACAAAGCTTCTAACTTCAAAAGCGACATCATGGCTGGTTTAACTCTTGCCAGTCTCAGCATTCCTCAGAGTATTGGGTATGCGAATTTGGCTAAGCTTGATCCTCAGTTTGATACAAGCGCTGTTCCTCCTTTGATCTATGCTCTAATGGGAAGCTCGAGAGAGATAGCCATTGGCCCAGTGGCTGTGGTGTCGCTGCTTCTTTCGTCTATGTTGCAAGAGATTCGAGATCCTGTTGCAGACCCAGTTGGTTATAGAAGCCTTGTTTTTACTGTCACCTTATTTGCAGGGATTTTCCAAGCAGGATTTGGGCTTCTGAGATTGGGGTTTCTTGTGGATTTTCTATCTCATGCTGCCATTGTTGGGTTCATGGCTGGAGCTGCCATTCTCATTGGTCTTCAGCAATTGAAAGGGTTGCTTGCTATTAGCAACTTCACGACCAAAACCGATGTGGTCTCTGTTTTGGAATCTGTCGTGAGATCTGCTCACCAGCCTGGTAGAAGGAAAAAGAAGCTGTTTTGGGTGTCAGCCATTGCTCCTCTCATATCTGTCATTCTCTCCACTTTGATAGTGTTTGTGTCAAGAGCTGATAGACATGGAGTTAAGATAGTTAAGGAAGTAAAAGAAGGGTTGAACCCAATCTCTGTTCATCAGCTGCAATTCAACAGCTCAGGTGTTGGCTTAGCTGCCAAATCTGGCCTCATTGCTGCCATCATAGCTCTCACAGAAGCGATGGCTGTTGGCCGATCCTTCGCCTCCATTAAAGGCTACAACATTGATGGGAACAGGGAGATGATTGCTATGGGCTTCATGAACATTATAGGCTCTCTAACCTCTTGCTATGTAGCCACTGGGTCATTCTCAAGAACGGCTGTGAATTTTAGTGCTGGGTGTGAGAGTGTATTGTCAAATATAGTGATGGCAATAACAGTGATGTTGGCATTGCAATTCTTCACAAGGCTCCTCTACTTCACTCCAATGGCCATTTTGGCTTCAATCATTCTCTCTGCTCTACCTGGTCTTATTGACATCAATGAAGCTCTGCGCATCTGGAAGCTCGACAAGCTTGACTTTCTTGCCTGTCTTGGCGCTTTCCTCGGTGTCTTGTTTCATTCCGTGGAATTTGGCCTTCTTCTTGCGGTGGGAAGGCTTGGAAGAAGTGACATGTTTGGCAACATGAAGCAATTCCCTATGGCCATGAAAACTCAAGGAATCTCCATTGTTAGAATAAACTCTAGCTTGCTTTGTTTTGCCAATGCCAGCTTCATCAAAGACAGAATAATGAGATTGGTCGAAGAAGATGATGAAGATGATGATATTGAAGAAACAACCAAAGATCAACCTAAACAACTAGTTGTTGACATGTGTAATGTTATGAATATCGACACGTCTGGGATCATTGTTCTAGAGGAACTTCACAAGAGGTTGTTATTGAACGGGATACAGGTAACAATAGCAAGTCCAAAATGGGAAGTGATTCACAAACTTAAAAGAACCAATTTTGTTGAAAGAATTGAAGGAAGGGTTTTCCTATCAGTTGGTGAAGCTGTGGATTCATGCCTTCAAAATGCTTCCAAATTGCCTTCTTCTACCAAAGTGCTTGTCACTTGA 1983 44.63 MTNTIKGKTRELTDSPRHFKPPSLMGSLPSDTLAVEMADTHVLAGAGDGAETTEWLLNSPNPPSFWEELAAAVRENVIPRSCTKTHLAKKKTKTTSSSDEKQSIFKATLILLQSMFPILKLGRNYKASNFKSDIMAGLTLASLSIPQSIGYANLAKLDPQFDTSAVPPLIYALMGSSREIAIGPVAVVSLLLSSMLQEIRDPVADPVGYRSLVFTVTLFAGIFQAGFGLLRLGFLVDFLSHAAIVGFMAGAAILIGLQQLKGLLAISNFTTKTDVVSVLESVVRSAHQPGRRKKKLFWVSAIAPLISVILSTLIVFVSRADRHGVKIVKEVKEGLNPISVHQLQFNSSGVGLAAKSGLIAAIIALTEAMAVGRSFASIKGYNIDGNREMIAMGFMNIIGSLTSCYVATGSFSRTAVNFSAGCESVLSNIVMAITVMLALQFFTRLLYFTPMAILASIILSALPGLIDINEALRIWKLDKLDFLACLGAFLGVLFHSVEFGLLLAVGRLGRSDMFGNMKQFPMAMKTQGISIVRINSSLLCFANASFIKDRIMRLVEEDDEDDDIEETTKDQPKQLVVDMCNVMNIDTSGIIVLEELHKRLLLNGIQVTIASPKWEVIHKLKRTNFVERIEGRVFLSVGEAVDSCLQNASKLPSSTKVLVT 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17123361 17129151 - Cp4.1LG01g20140.1 Cpe01g02010 463323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02010 660 PANTHER SULFATE TRANSPORTER 2.2 50 649 IPR030315 GO:0008272|GO:0015116
Cpe01g02010 660 Pfam Sulfate permease family 291 486 IPR011547 GO:0016021
Cpe01g02010 660 Pfam Sulfate permease family 130 288 IPR011547 GO:0016021
Cpe01g02010 660 MobiDBLite consensus disorder prediction 1 26 - -
Cpe01g02010 660 SUPERFAMILY SpoIIaa-like 525 644 IPR036513 -
Cpe01g02010 660 Gene3D STAS domain 515 650 IPR036513 -
Cpe01g02010 660 PANTHER SULFATE TRANSPORTER 50 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe01g02010 660 Pfam STAS domain 523 640 IPR002645 -
Cpe01g02010 660 CDD STAS_SulP_like_sulfate_transporter 520 635 - -
Cpe01g02010 660 ProSiteProfiles STAS domain profile. 539 644 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02010 Cpe-Chr1:17123361 Cpe15g00240 Cpe-Chr15:2196356 0 dispersed
Cpe14g00581 Cpe-Chr14:3688915 Cpe01g02010 Cpe-Chr1:17123361 0 transposed
Cpe01g02010 Cpe-Chr1:17123361 Cpe13g00577 Cpe-Chr13:5683783 0 wgd
Cpe01g02010 Cpe-Chr1:17123361 Cpe02g00526 Cpe-Chr2:3113853 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02010 K17469 - csv:101211892 964.911