Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g02016 | ATGGGCTCGATAGACGTCCAATCAGACAATGCCGAAGATGGATCCGCCGCCGCCGCCTCTGCCGATGGACATCAAAAGAAAGTTTCCGCCGACCCTATAAACCAGACATCTAACGAACCAGACGGAGCTACGCCTGAGAAGCCTAAAGAATTGGAGCCGACGAAGAAGCGTATGTCCTCCATGCTTCCTCTCGAGGTTGGGACCCGCGTCATGTGCCGCTGGAGAGACGGGAAGTACCATCCCGTTAAGGTCATCGAACGTCGGAAGTTACAGGCTACTGGTTTTAGTGATTACGAATACTATGTCCATTACACCGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGAATCAGTTGAGACTGTTGTTGATGAGAAAGTGGAGGACAAGGTAACAGGATTGAAGATGACCCGACACCAGAAGCGGAAGATTGATGAAACACATGTTGAGGGCCATGAGGAACTTGATGCTGCTAGCTTGAGGGAGCATGAAGAATTTACAAAAGTTAAGAATATTGCAACAATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCCTTTCCACCAGAATACAATGACACTACGAAGCTCTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTCCAGAGACATATGAGGAAGTGTGATCTCAAGCATCCACCTGGTGATGAAATATATCGAAGTGGTACTTTGTCAATGTTTGAGGTTGACGGAAAAAAGAACAAGGTCTATGGGCAGAACCTCTGTTATTTAGCGAAGTTATTTCTTGACCACAAGACTCTATATTATGATGTGGACCTTTTTCTATTTTATATCCTGTGTGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCAAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCATGCATTCTCACCCTTCCTCCTTATCAAAGGAAGGGCTATGGGAAGTTCTTAATGGCTTTTTCTTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGCACTCCTGAAAGACCTCTTTCTGACCTTGGGTTGGTGAGCTACAGAGGATACTGGACCAGGGTACTTTTAGACATCTTGAAAAAACACAAGGGGAATATCTCTATCAAGGAGCTAAGCGACATGACAGCCATCAAAGCCGAAGATATTTTGAACACACTTCAGAGCCTGGAGTTGATTCAATACAGGAAAGGGCAGCATGTTATATGTGCCGACCCCAAGGTGCTGGATCGTCATCTTAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAAGGTTGA | 1350 | 44.67 | MGSIDVQSDNAEDGSAAAASADGHQKKVSADPINQTSNEPDGATPEKPKELEPTKKRMSSMLPLEVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLESVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYILCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLMAFSYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQG | 449 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 17161629 | 17167046 | - | Cp4.1LG01g20150.1 | Cpe01g02016 | 463329 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g02016 | 449 | Gene3D | - | 232 | 444 | - | - | |
Cpe01g02016 | 449 | Gene3D | - | 53 | 173 | - | - | |
Cpe01g02016 | 449 | Gene3D | - | 352 | 432 | IPR036388 | - | |
Cpe01g02016 | 449 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 174 | 445 | IPR016181 | - | |
Cpe01g02016 | 449 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 173 | 444 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
Cpe01g02016 | 449 | Pfam | RNA binding activity-knot of a chromodomain | 64 | 122 | IPR025995 | - | |
Cpe01g02016 | 449 | Pfam | MOZ/SAS family | 234 | 411 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
Cpe01g02016 | 449 | PANTHER | HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 | 21 | 448 | - | - | |
Cpe01g02016 | 449 | SUPERFAMILY | Chromo domain-like | 55 | 174 | IPR016197 | - | |
Cpe01g02016 | 449 | PANTHER | HISTONE ACETYLTRANSFERASE | 21 | 448 | - | - | |
Cpe01g02016 | 449 | Pfam | MYST family zinc finger domain | 175 | 229 | IPR040706 | - | |
Cpe01g02016 | 449 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Cpe01g02016 | 449 | Gene3D | - | 174 | 230 | - | - | |
Cpe01g02016 | 449 | CDD | NAT_SF | 285 | 343 | - | - | |
Cpe01g02016 | 449 | CDD | CBD_MOF_like | 67 | 136 | - | - | |
Cpe01g02016 | 449 | SMART | chromo_7 | 78 | 137 | IPR000953 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g02016 | Cpe-Chr1:17161629 | Cpe13g00585 | Cpe-Chr13:5723550 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g02016 | K11308 | - | csv:101217824 | 850.506 |