Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02016 ATGGGCTCGATAGACGTCCAATCAGACAATGCCGAAGATGGATCCGCCGCCGCCGCCTCTGCCGATGGACATCAAAAGAAAGTTTCCGCCGACCCTATAAACCAGACATCTAACGAACCAGACGGAGCTACGCCTGAGAAGCCTAAAGAATTGGAGCCGACGAAGAAGCGTATGTCCTCCATGCTTCCTCTCGAGGTTGGGACCCGCGTCATGTGCCGCTGGAGAGACGGGAAGTACCATCCCGTTAAGGTCATCGAACGTCGGAAGTTACAGGCTACTGGTTTTAGTGATTACGAATACTATGTCCATTACACCGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGAATCAGTTGAGACTGTTGTTGATGAGAAAGTGGAGGACAAGGTAACAGGATTGAAGATGACCCGACACCAGAAGCGGAAGATTGATGAAACACATGTTGAGGGCCATGAGGAACTTGATGCTGCTAGCTTGAGGGAGCATGAAGAATTTACAAAAGTTAAGAATATTGCAACAATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCCTTTCCACCAGAATACAATGACACTACGAAGCTCTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTCCAGAGACATATGAGGAAGTGTGATCTCAAGCATCCACCTGGTGATGAAATATATCGAAGTGGTACTTTGTCAATGTTTGAGGTTGACGGAAAAAAGAACAAGGTCTATGGGCAGAACCTCTGTTATTTAGCGAAGTTATTTCTTGACCACAAGACTCTATATTATGATGTGGACCTTTTTCTATTTTATATCCTGTGTGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCAAAGGAAAAGCATTCAGAGGAATCCTATAATTTGGCATGCATTCTCACCCTTCCTCCTTATCAAAGGAAGGGCTATGGGAAGTTCTTAATGGCTTTTTCTTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGCACTCCTGAAAGACCTCTTTCTGACCTTGGGTTGGTGAGCTACAGAGGATACTGGACCAGGGTACTTTTAGACATCTTGAAAAAACACAAGGGGAATATCTCTATCAAGGAGCTAAGCGACATGACAGCCATCAAAGCCGAAGATATTTTGAACACACTTCAGAGCCTGGAGTTGATTCAATACAGGAAAGGGCAGCATGTTATATGTGCCGACCCCAAGGTGCTGGATCGTCATCTTAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAAGGTTGA 1350 44.67 MGSIDVQSDNAEDGSAAAASADGHQKKVSADPINQTSNEPDGATPEKPKELEPTKKRMSSMLPLEVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLESVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYILCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLMAFSYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQG 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17161629 17167046 - Cp4.1LG01g20150.1 Cpe01g02016 463329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02016 449 Gene3D - 232 444 - -
Cpe01g02016 449 Gene3D - 53 173 - -
Cpe01g02016 449 Gene3D - 352 432 IPR036388 -
Cpe01g02016 449 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 174 445 IPR016181 -
Cpe01g02016 449 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 173 444 IPR002717 GO:0004402|GO:0006355|GO:0016573
Cpe01g02016 449 Pfam RNA binding activity-knot of a chromodomain 64 122 IPR025995 -
Cpe01g02016 449 Pfam MOZ/SAS family 234 411 IPR002717 GO:0004402|GO:0006355|GO:0016573
Cpe01g02016 449 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 21 448 - -
Cpe01g02016 449 SUPERFAMILY Chromo domain-like 55 174 IPR016197 -
Cpe01g02016 449 PANTHER HISTONE ACETYLTRANSFERASE 21 448 - -
Cpe01g02016 449 Pfam MYST family zinc finger domain 175 229 IPR040706 -
Cpe01g02016 449 MobiDBLite consensus disorder prediction 1 59 - -
Cpe01g02016 449 Gene3D - 174 230 - -
Cpe01g02016 449 CDD NAT_SF 285 343 - -
Cpe01g02016 449 CDD CBD_MOF_like 67 136 - -
Cpe01g02016 449 SMART chromo_7 78 137 IPR000953 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02016 Cpe-Chr1:17161629 Cpe13g00585 Cpe-Chr13:5723550 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02016 K11308 - csv:101217824 850.506