Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02043 CGAAAGCTTATGATAGGTATGAATGCTAACATTATGAGTAAGTTGAAGCCTTACATTCTAGTGGTGTGCTTACAATTTGGAATGGCTGGCATATATGTGATATCCATGGCTACTCTTAACCGCGGTATGAGTCGCTATGTTTTGATCGTCTACCGAAACGCTGTCGCCGCTCTCTTCCTCGCTCCCTTTGCACTGATCTTCGAAAGGAAAACAAGGCCAAAGATGACACTCCCGGTTGCTATGCAAATCATGGTCTTGGGATTTCTCGAACCGGTTCTCGATCAGGGGTTCGGTTATTTGGGGATGTCGTATACGTCAGCGTCGTTTACGTCGGCTATCATGAACGCTGTGCCGTCTATTACCTTCATCATTGCAGTGGTTTTTCGAATGGAGCGAGTCAATTTGAAACGAGTGCGAGGGGTTGCTAAGGTCATTGGAACTTTGGTGACCTTCGCCGGAGCTTTGGTTATGACGCTTTACAAAGGCCCAATAGTGGATTTCTTTTGGACTCGGAAAACCAACCACCTTGTTCATAGCGCCTCCGCCGCTTCCGCCGCCGCCAATCAGCACTGGGTGGCAGGAACTCTGTTCATCCTCCTGGCTTGCGTGGCTTGGTCTTGTTTCTATTCTGTGACAGTGAAGAGATACCCAGCGGAGCTATCACTTTCGACATTGATATGCATGGCTGGTGTGGTTCAAACCACAGTGATAGCAGTGGCCTTTGAGCATCGTGCTAGCTCATGGGCGGTGGGCTGGGACTCCAGGCTTCTGGCTCCTCTCTATACGGGAATAGTTGGCTCAGGAATTACATATTACTTCCAAGCTCTTGTAATGAAGACTAGAGGCCCTGTGTTTGTGACGGCTTTCAACCCTTTCGTTATTGGAGCCATTATCATAGCAATTGGGCTTTATTCAGTTGTTTGGGGCAAAAGCAAGGATTATTCCACCGCCGCTGGCCACCTTGAAAAGTCTAACGCCGCCGCTTCAATTGCAGTTATGTACACCATTGTCGCTATTTCTCTTAAGCATGGCCTTAACCATTTTGTGTTTTCTGTCTATCGCCATGCTGTCGCCACCGTCATTCTTGCCCCTTTCGCTCTCATTCTCGAAAGGTCGATTTCTAGCTCTTTCTCTATAGAGAAGGAAAACGAGACCTCGAATGACATTGCCCGTCTTCTGGCGAATTTTGTTGCTCGGTTTTCTAGAGCCCGTTCTCGACCAGAATTTATACTATTTGGGAATGAAGTACACATCGTCAACATTTGCATAGCCGGAACTGTAATAGCGATCACCGGAGCCATGGTTATGAGCCTGTACAAAGGGCCGGCTTTCAACTTCCTTCCGAGCACTGGCCGTAGCGAAATGAGCCACACCGAACCGGCGACAGACCGGCACTGGGTCTCCGGCAGCATCTTCGTCTTTATCAGTTGCTTCTGCGCGTCCGCCTTTTATATCTTACAGTCCATGACATTGACAATGTACCCTGCCGGGATTTCGCTGGCAGCTTTGATATGCCTGACCGGAACGGTGGAAGGCGGCGCCGTCACCCTCGCCGCCGAACGTAACATGATGGTCTGGATTGTCGGCTGGGATTCCAGACTTCTGGCCATCCTTTACTCCGGAATAGTATGCTCTGGAATTGCATATTACGTTCAAGGAGTAGTGATGAAGGAACGCGGCCCGGTTTTTGTGACGTCATTCAGCCCTCTCTGTACGGTCATCACGGCGGCGCTCAGCTCCATTTTCTTGGCCGACAAAGTTCATGTCGGAAGTTTGATTGGGGCGGCGATCGTGATGTTTGGATTGTATACTTTGATTTGGGGCACGAGGATAGATTTTGAAACCTCAAAACAATCTAATCACGTCACCCAATTGCCGATCACCGGTGATGTTGCCGGGAAGACGGCGGACGGTCCCGCCAAGCCTCCAGTTGTGTAG 1938 49.64 RKLMIGMNANIMSKLKPYILVVCLQFGMAGIYVISMATLNRGMSRYVLIVYRNAVAALFLAPFALIFERKTRPKMTLPVAMQIMVLGFLEPVLDQGFGYLGMSYTSASFTSAIMNAVPSITFIIAVVFRMERVNLKRVRGVAKVIGTLVTFAGALVMTLYKGPIVDFFWTRKTNHLVHSASAASAAANQHWVAGTLFILLACVAWSCFYSVTVKRYPAELSLSTLICMAGVVQTTVIAVAFEHRASSWAVGWDSRLLAPLYTGIVGSGITYYFQALVMKTRGPVFVTAFNPFVIGAIIIAIGLYSVVWGKSKDYSTAAGHLEKSNAAASIAVMYTIVAISLKHGLNHFVFSVYRHAVATVILAPFALILERSISSSFSIEKENETSNDIARLLANFVARFSRARSRPEFILFGNEVHIVNICIAGTVIAITGAMVMSLYKGPAFNFLPSTGRSEMSHTEPATDRHWVSGSIFVFISCFCASAFYILQSMTLTMYPAGISLAALICLTGTVEGGAVTLAAERNMMVWIVGWDSRLLAILYSGIVCSGIAYYVQGVVMKERGPVFVTSFSPLCTVITAALSSIFLADKVHVGSLIGAAIVMFGLYTLIWGTRIDFETSKQSNHVTQLPITGDVAGKTADGPAKPPVV 645
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17350414 17357190 + Cp4.1LG01g20430.1 Cpe01g02043 463356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02043 645 PANTHER WAT1-RELATED PROTEIN 331 374 IPR030184 GO:0016021|GO:0022857
Cpe01g02043 645 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Cpe01g02043 645 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Cpe01g02043 645 Pfam EamA-like transporter family 468 606 IPR000620 GO:0016020|GO:0016021
Cpe01g02043 645 PANTHER WAT1-RELATED PROTEIN 11 293 - -
Cpe01g02043 645 PANTHER WAT1-RELATED PROTEIN 423 627 - -
Cpe01g02043 645 PANTHER WAT1-RELATED PROTEIN 331 374 - -
Cpe01g02043 645 PANTHER WAT1-RELATED PROTEIN 293 326 IPR030184 GO:0016021|GO:0022857
Cpe01g02043 645 PANTHER WAT1-RELATED PROTEIN 293 326 - -
Cpe01g02043 645 PANTHER WAT1-RELATED PROTEIN 11 293 IPR030184 GO:0016021|GO:0022857
Cpe01g02043 645 PANTHER WAT1-RELATED PROTEIN 423 627 IPR030184 GO:0016021|GO:0022857
Cpe01g02043 645 SUPERFAMILY Multidrug resistance efflux transporter EmrE 525 610 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02043 Cpe06g00635 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02043 Cpe-Chr1:17350414 Cpe01g02280 Cpe-Chr1:19291497 1.40E-89 dispersed
Cpe01g02043 Cpe-Chr1:17350414 Cpe06g00635 Cpe-Chr6:3930842 1.78E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02043 - - csv:101217521 516.153