Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02068 ATGCGAGCCATACTGATTGATTGGCTCGTGGAGGTAGCAGAAGAGTACAGGCTTGTGCCAGATACTCTATACTTGACTGTGAACTACATCGATCGATACCTATCGGGGAATTCGATGGATCGACAACGGTTACAGCTGCTTGGTGTTGCTTGTATGATGATTGCTTCAAAATATGAAGAGATCTGTGCACCTCAAGTGGAAGAATTTTGTTACATAACTGATAACACATACTTCAAAGAAGAGGTTTTGCAAATGGAATCATCTGTGTTGAATTACTTGAAGTTTGAAATGACAGCTCCAACACCCAAATGTTTTTTAAGACGATTTGTTCGTGTTGCTCGAGGCGTCGATGAGGTTTCATCGATGCAGTTGGAGTGCTTGTCGAACTTCATCGCCGAATTGTCTCTTTTAGAATACAATATGCTCTGCTACGCCCCGTCGCTCATAGCTGCCTCGGCGGACCTCACCTTGCAACATTACACACATTACCAGCCATCCGATCTCGTCGACTGTGTTAAGGATTTGCATCGCCTCTGCTGTAACAGCCATAGTTCAAGCTTACCAGCAATCAGAGAGAAATACAGCCAGCATAAGTACAAACATGTGACAACCAAGTACTGCCCTCCGACAATACCGACCGAGTTTTTCCAGAATCGAACGCAGTAG 666 44.59 MRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNSMDRQRLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKFEMTAPTPKCFLRRFVRVARGVDEVSSMQLECLSNFIAELSLLEYNMLCYAPSLIAASADLTLQHYTHYQPSDLVDCVKDLHRLCCNSHSSSLPAIREKYSQHKYKHVTTKYCPPTIPTEFFQNRTQ 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17525206 17536624 + Cp4.1LG01g20680.1 Cpe01g02068 463381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02068 221 Gene3D - 1 98 - -
Cpe01g02068 221 SUPERFAMILY Cyclin-like 100 211 IPR036915 -
Cpe01g02068 221 ProSitePatterns Cyclins signature. 2 33 IPR006671 -
Cpe01g02068 221 PANTHER CYCLIN-A1-1 1 219 - -
Cpe01g02068 221 CDD CYCLIN 98 176 IPR013763 -
Cpe01g02068 221 Pfam Cyclin, N-terminal domain 1 97 IPR006671 -
Cpe01g02068 221 SMART Cyclin_C_2 100 208 IPR004367 -
Cpe01g02068 221 CDD CYCLIN 1 90 IPR013763 -
Cpe01g02068 221 Gene3D - 99 204 - -
Cpe01g02068 221 PANTHER CYCLINS 1 219 IPR039361 -
Cpe01g02068 221 Pfam Cyclin, C-terminal domain 100 204 IPR004367 -
Cpe01g02068 221 PIRSF Cyclin_A_B_D_E 1 216 IPR039361 -
Cpe01g02068 221 SUPERFAMILY Cyclin-like 1 97 IPR036915 -
Cpe01g02068 221 SMART cyclin_7 104 177 IPR013763 -
Cpe01g02068 221 SMART cyclin_7 7 91 IPR013763 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02068 Cpe-Chr1:17525206 Cpe12g00714 Cpe-Chr12:6723254 1.95E-79 dispersed
Cpe01g02068 Cpe-Chr1:17525206 Cpe13g00635 Cpe-Chr13:6074518 2.95E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02068 K06627 - csv:101221569 403.29