Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02161 ATGGCGTCGGATTGGCCGCTCTTGATTGTATCTCCAAGAACGCCCAAAACTACATCTCACGATCTACAAAAACAGGATCCGAACCAACCTGGATTGTTCTTCGCGATGAATGAGAACTTAGCGAGTACTGAACTAGGTCACCGCGCTTTCTCGCGGCGAAGTCAATCGTCGCTACAATCGAAATCCTCAATTCGCGAAGTGAGTTCTAGTGATGATTTTGGATCGAGGCCTGTTCGTCATGGTTCTCGAGGTGCCGATTCTGAAGCACTGAGCTTATCACAGAAGGAGATCAATGACGAAGATGCGAGGTTGATTTACATCGATGATCCTGAGAAGACGAACGAGAAGTTCGAATTCGCTAGAAATTCGATTCGCACCGGCAAGTATTCGATTCTAACTTTTCTACCGAGAAATCTGTTTGAACAGTTTCATAGAATTGCTTATATATATTTCCTAGCCATTGCTGTTCTTAATCAACTTCCTCAGCTTGCCGTTTTTGGTCGAACAGTATCTATTTTGCCTTTAGCTTTTGTGCTTCTTGTTACTGCTGTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAGATTGAGAACAATAGATTAGCTTCAGTTTTGGTTGATGGTCAGTTTCATGATAAGAAATGGAAGGATATTAGAGTTGGTGAGATACTTAAGATTGGTGCAAATGGTACCATTCCTTGTGATATGGTGCTTCTTTCTACTAGTGATTCCACAGGGGTTGCTTATGTGCAGACCTTGAATTTGGACGGCGAATCGAATTTGAAAACGAGGTATGCGAAACAGGAGACGATGTCGAAAATGCCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAAACCCAATAGGAATATCTATGGATTTCATGCTAATATGGAGATTGATGGGAAACGACTTTCACTTGGACCTCCAAACATTGTTCTTCGAGGTTGTGAGCTCAAGAACACGAGCTGGGCGGTTGGCGTTGCTGTATATGCTGGCCGTGAGACCAAAGCCATGCTTAATAGTTCTGGAGCTCCGTCGAAAAGAAGTCGACTCGAGACTCGTATGAATGTGGAGATTATTATGCTCTCTTTCTTTCTCATTGCTTTGTGTATAGTTGTTTGTGTTCTTGCTGCTGTTTGGTTCTTTAGAAACAGGGAAGATTTGGATGTTTTGCCTTATTTCAGGAATAAGGATTTCTCAAAAGATCCACCTGAAACCTATAACTATTATGGATGGGGATTGGAGGCCTTTTTTGTATTCCTCATGTCAGTCATTGTGTTTCAGATCATGATCCCTATTTCACTTTACATTTCGATGGAGCTTGTTCGTGTTGGCCAGGCTTATTTCATGATTCGAGACGTTCAAATGTACGATGAAACATCGAATTCTAGATTTCAGTGTCGAGCTTTGAACATAAATGAGGATTTAGGACAAATAAAGTATGTTTTTTCAGACAAAACGGGTACTCTGACTGAGAATAAGATGGAGTTTCGATGTGCTAGCATTTCGGGGGTCGATTATGCAGGTGAAAGTACCGGCCCCCTCGACGAACAGATTGGATACTCGGCTCGAGTGGATGGAAAGGTTTTGAGACCGAAAATGGCTGTCAAAACCGACCCCGAGCTTCTACAGTTATCAAGAAGTGGAAAGCACACCAAGAATGGAAGATATATTCATGATTTCTTCCTGGCATTAGCTGCTTGCAATACCATTGTTCCTCTTATTACAGAAACTTCTGATCCTTCAGTGCAATTAGTTGACTACCAAGGCGAGTCCCCGGATGAACAGGCGTTGGTTTATGCTGCTGCGGCATACGGTTTTATGCTGATCGAACGAACCTCTGGTCATATAGTTATCGACATACATGGTACAAAAGAAAGATATAATGTTTTGGGAATGCACGAGTTTGATAGCGACAGGAAGCGGATGTCGGTGATATTGGGATGTCCCGACATGTCCTTCAAAGTATTTGTAAAAGGTGCTGATAACTCCATGTTCAAGGTGATGGGTGGAAATACGAACACGAGTATCATTCAAGCCACTAAAGCTCATCTTCATTCATACTCATCAAAGGGTCTCAGAACACTGGTTATTGGGATGAAAGAACTCAGTTCTTCTGACTTTGATAAATGGCACTTGATGTTTGAGGAAGCAAGCACTGCTCTGATCGGCAGAGCAGCCAAGCTTCGCAAGGTTTCCAGTAGCATAGAAAACAATTTGTCCATATTGGGGGCCTCTGGCATTGAAGATAAGTTACAAAAAGGTGTTCCAGAAGCTATAGAAGCTTTAAGAATGGCAGGCATTAAAGTATGGGTTTTGACCGGGGATAAGCAAGAAACAGCCATATCAATAGGTTACTCCTCCAAGCTCTTGACAAACAAGATGACCCAAATTATCATTAACAGCAACTCGGTTGATTCATGCCGAAGGAGTTTAGAAGATGCAATAATTATGTCGAAAAAGCTTGCTACTGCGTCGGGGGTTACACTGGATAGCGAAGGACGTACCGAAGCTATAACGGCTTCGGTTGCGTTGATCATTGATGGTAGCAGCCTTGTTCATATTCTTGACAGTAGACTTGAAGAACAGCTTTTCCAACTATCTTGTCACTGTTCGGTGGTGTTATGCTGTCGAGTTGCTCCATTGCAGAAAGCTGGAATTGTTGCTCTTGTCAAGAGAAGGACTTCTGACATGACACTTGCCATTGGTGATGGCGCAAATGACGTGTCGATGATCCAAAAGGCGGATGTGGGTGTCGGTATCAGCGGTCTAGAGGGTCGACAAGCTGTCATGGCGTCGGATTTCGCCATGGGGCAATTTAGATTCTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGCATGGGCTACATGATCTTGTACAACTTTTACAGAAATGCAGTATTTGTGCTTGTTCTCTTTTGGTACGTACTCTTCACCGGTTACTCGTTATCGACCGCGATCAACCAATGGAGCAGTGTACTCTACTCTATAATCTATACTTGTTTGCCCACAATTGTTGTTGGAATTCTTGACAAAGACTTAGGAAGAAGGACCCTTCTTAGTTACCCTCAACTCTATGGGGCTGGCCATAGACAAGAGAGCTACAACTCTGGCTTGTTTTGGTTAACAATGGTCGACACTGTGTGGCAAAGCATTGCTATTTTCTTCATCCCCCTCCTTTCCTTCTGGGCTACCACCGTCGACATTTCAGGCCTCGGAGATCTCTGGCTACTCGCTACGGTCATCGTCGTCAACTTACACTTGGCAATGGACGTGTTTCGATGGTATTCCATCACCCATGCCGTGATTTGGGGATCCACTCTCGCAACAATCATTTGCGTCATTGTTCTTGATTCGATATTGTCGCTTCCCGGTTACTGGGCGATATATCACGTGGCGGGCACAGCATCTTTTTGGCTATGTTTGTTGTCGATCGTCGTTGTAGCGTTACTTCCTCGGTTCATCGTAAAGTACCTTTATCAATATTATAGTCCATGTGACATCCAAATAGCAAGAGAGGCTGATAAATTTGGAAGGATAAGAGAGATGGGAGTTGTACAAACAGAGATGATCCCAGTCCTCAACAATCCTTCACAACTATGA 3633 43.41 MASDWPLLIVSPRTPKTTSHDLQKQDPNQPGLFFAMNENLASTELGHRAFSRRSQSSLQSKSSIREVSSSDDFGSRPVRHGSRGADSEALSLSQKEINDEDARLIYIDDPEKTNEKFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLAIAVLNQLPQLAVFGRTVSILPLAFVLLVTAVKDAYEDWRRHRSDKIENNRLASVLVDGQFHDKKWKDIRVGEILKIGANGTIPCDMVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNVEIIMLSFFLIALCIVVCVLAAVWFFRNREDLDVLPYFRNKDFSKDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDVQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASISGVDYAGESTGPLDEQIGYSARVDGKVLRPKMAVKTDPELLQLSRSGKHTKNGRYIHDFFLALAACNTIVPLITETSDPSVQLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGTKERYNVLGMHEFDSDRKRMSVILGCPDMSFKVFVKGADNSMFKVMGGNTNTSIIQATKAHLHSYSSKGLRTLVIGMKELSSSDFDKWHLMFEEASTALIGRAAKLRKVSSSIENNLSILGASGIEDKLQKGVPEAIEALRMAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSVDSCRRSLEDAIIMSKKLATASGVTLDSEGRTEAITASVALIIDGSSLVHILDSRLEEQLFQLSCHCSVVLCCRVAPLQKAGIVALVKRRTSDMTLAIGDGANDVSMIQKADVGVGISGLEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTGYSLSTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLSYPQLYGAGHRQESYNSGLFWLTMVDTVWQSIAIFFIPLLSFWATTVDISGLGDLWLLATVIVVNLHLAMDVFRWYSITHAVIWGSTLATIICVIVLDSILSLPGYWAIYHVAGTASFWLCLLSIVVVALLPRFIVKYLYQYYSPCDIQIAREADKFGRIREMGVVQTEMIPVLNNPSQL 1210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18463254 18470241 + Cp4.1LG01g25190.1 Cpe01g02161 463474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02161 1210 Gene3D - 746 948 IPR023214 -
Cpe01g02161 1210 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Cpe01g02161 1210 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 496 722 IPR023299 GO:0000166
Cpe01g02161 1210 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 421 514 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe01g02161 1210 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 878 991 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe01g02161 1210 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Cpe01g02161 1210 PRINTS P-type cation-transporting ATPase superfamily signature 908 927 - -
Cpe01g02161 1210 Pfam E1-E2 ATPase 205 447 - -
Cpe01g02161 1210 CDD P-type_ATPase_APLT_Dnf-like 121 1068 - -
Cpe01g02161 1210 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 5 1208 - -
Cpe01g02161 1210 Pfam Phospholipid-translocating ATPase N-terminal 105 171 IPR032631 -
Cpe01g02161 1210 SFLD p-type atpase 473 959 IPR044492 -
Cpe01g02161 1210 MobiDBLite consensus disorder prediction 12 31 - -
Cpe01g02161 1210 SUPERFAMILY Calcium ATPase, transduction domain A 202 343 IPR008250 -
Cpe01g02161 1210 Gene3D - 592 726 IPR023299 GO:0000166
Cpe01g02161 1210 MobiDBLite consensus disorder prediction 51 92 - -
Cpe01g02161 1210 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 119 1183 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cpe01g02161 1210 MobiDBLite consensus disorder prediction 1 31 - -
Cpe01g02161 1210 Gene3D - 180 346 - -
Cpe01g02161 1210 MobiDBLite consensus disorder prediction 51 70 - -
Cpe01g02161 1210 Pfam Phospholipid-translocating P-type ATPase C-terminal 936 1175 IPR032630 -
Cpe01g02161 1210 Pfam Cation transport ATPase (P-type) 597 673 - -
Cpe01g02161 1210 SUPERFAMILY HAD-like 476 949 IPR036412 -
Cpe01g02161 1210 SFLD C1.7: P-type atpase like 473 959 - -
Cpe01g02161 1210 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1174 IPR023298 -
Cpe01g02161 1210 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 5 1208 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02161 Cpe-Chr1:18463254 Cpe10g01002 Cpe-Chr10:5751796 0 dispersed
Cpe01g02161 Cpe-Chr1:18463254 Cpe13g00729 Cpe-Chr13:6703696 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02161 K14802 - csv:101212953 2177.13