Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02197 ATGTTAACGAGTCCCCTTCGTGGGGATCTAGAGGTGTCGACTGCTTCGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGGCACAGCTCATGTTCATGGAGTACTGCAATTTTCACTAAGTCAAGTTTACATGGCCAGAGAATTGAGAACAGGTGAAATAGTTGCACTCAAGAAAATACGAATGGATAATGAGAGGGAGGGGTTTACTCTGCCATTATATGAGAAGACCAGAGTTGCCAGTGCTGGTTTTAGACTTGAAATTTCAAAATTCCCTATTACTGCCATTCGAGAAATCAAAATTCTAAAGAAGCTCCACCATGAAAATGTAATCAAATTGAAAGAGATTGTGACATCTCCAGATGGTAACAAGTACAAGGGTGGCATCTACATGGTTTTCGAGTACATGGACCATGATTTGACAGGTCTTGCTGATCGTCCAGGGATGAGGTTTTCAGTTCCCCAAATCAAGTGCTACATGAAGCAGCTTCTCACAGGGCTTCACTATTGTCATGTAAATCAAGTACTGCATAGGGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCCGATCATTTTCTAATGATATCAATGCAAATCTAACAAATCGTGTCATTACCTTATGGTATAGACCTCCTGAATTGCTTCTTGGATCAACAAAATATGGTCCAGCTGTAGACATGTGGTCTGTTGGTTGTATTTTTGCAGAGCTTCTACATGGGAAGCCAATATTCCCTGGCAAGGACGAGCCGGAACAATTAAATAAGATCTTTGAGCTATGTGGCGCTCCGGATGAAGTAAATTGGCCCGGGGTTTCTAAAATCCCATGGTACAACAATTTCAAGCCCACAAGGCCGATGAAGAGACGTCTTAGAGAAGTTTTCAGGCATTTTGATCGTCATGCTTTAGAGCTGTTGGAGAAGATGCTCACTCTTGATCCTTCTCAGAGGATATCTGCTAAGGATGCTCTAGATGCGGAGTATTTTTGGACAGACCCATTGCCCTGTGATCCTAAGAGTTTGCCAAAGTACGAATCATCACACGAGTTCCAGACGAAGAAGAAGCGTCAGCAGCAACGACAACATGAAGAAACTGCAAAGAGACAGAAGTTGCAACACCAGCAGCATTCACGCCTCCCACCTATACAGCAGTCGGGACAAGCTCATGCACAGATGCGACCAGTACCTAACCAACCCCTTCATGGTTCTCAACCCCCCGTTGCTGCAGGGCCTAGCCATCATTTTGGTGGGAAGCCTCGTGGACCCCCAGGTCCTGGTAGGTATCCCTCTGGTGGAAATCCTCCTTCTGGATACAACCACCCAAGTCGTGGTGGTCAAAGCGGGGGTTCTTATGGCAATGCACAATACGCTCAAGGACGAGGTGCACCATATGGTTCTGGTAATATGTCTGGTGCTGGTCCTCGAGGCGGAGCTGGAGCCGGTGGTGGTGGTGGTGGTGGTGGTTATGGCGCGGGAGCTCCAAATTACCCACAGAATGGTCCATATGCTGGTAGTTCTGGTACTGGGCGTGGCTCCAATGTAATGGGCGGAAACCGAAACCAACAATATGGATGGCAACAATGA 1617 46.2 MLTSPLRGDLEVSTASKNWSRLVKALMGTAHVHGVLQFSLSQVYMARELRTGEIVALKKIRMDNEREGFTLPLYEKTRVASAGFRLEISKFPITAIREIKILKKLHHENVIKLKEIVTSPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDINANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHQQHSRLPPIQQSGQAHAQMRPVPNQPLHGSQPPVAAGPSHHFGGKPRGPPGPGRYPSGGNPPSGYNHPSRGGQSGGSYGNAQYAQGRGAPYGSGNMSGAGPRGGAGAGGGGGGGGYGAGAPNYPQNGPYAGSSGTGRGSNVMGGNRNQQYGWQQ 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 18687701 18693381 - Cp4.1LG01g24850.1 Cpe01g02197 463510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02197 538 Gene3D Transferase(Phosphotransferase) domain 1 138 380 - -
Cpe01g02197 538 SUPERFAMILY Protein kinase-like (PK-like) 40 348 IPR011009 -
Cpe01g02197 538 ProSiteProfiles Protein kinase domain profile. 29 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g02197 538 Gene3D Phosphorylase Kinase; domain 1 37 137 - -
Cpe01g02197 538 MobiDBLite consensus disorder prediction 446 465 - -
Cpe01g02197 538 Coils Coil 365 385 - -
Cpe01g02197 538 CDD STKc_CDK9_like 41 340 - -
Cpe01g02197 538 MobiDBLite consensus disorder prediction 353 382 - -
Cpe01g02197 538 MobiDBLite consensus disorder prediction 351 538 - -
Cpe01g02197 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Cpe01g02197 538 MobiDBLite consensus disorder prediction 510 538 - -
Cpe01g02197 538 SMART serkin_6 39 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g02197 538 Pfam Protein kinase domain 40 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe01g02197 538 PANTHER CELL DIVISION PROTEIN KINASE 90 469 - -
Cpe01g02197 538 PANTHER CELL DIVISION PROTEIN KINASE 41 71 - -
Cpe01g02197 538 PANTHER CYCLIN-DEPENDENT KINASE C-2 90 469 - -
Cpe01g02197 538 PANTHER CYCLIN-DEPENDENT KINASE C-2 41 71 - -
Cpe01g02197 538 MobiDBLite consensus disorder prediction 386 403 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02197 Cpe-Chr1:18687701 Cpe16g00933 Cpe-Chr16:8608624 0 dispersed
Cpe01g02197 Cpe-Chr1:18687701 Cpe02g01011 Cpe-Chr2:9322587 9.88E-108 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62184 PF00069 Pkinase 1.10E-64 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02197 K08819 - csv:101220936 836.254