Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe01g02241 | ATGGCGAAGAATGCAGCGGAACGCGGCTCGTTCTCGGCGAAGGACTACCACGATCCACCACCGGCGCCGCTCATCGATGCCGTGGAGATTACGAAATGGTCGTTTTACAGAGCTCTGATTGCGGAGTTCATAGCCACTCTGCTTTTCCTGTACGTCACTGTGTTGACGGTGATCGGCTACAAATCGCAGACGGATCATACCGGCAACAAGAACAATGATGCTTGCGGTGGCGTTGGGATTCTTGGCATTGCCTGGGCGTTTGGTGGAATGATCTTCGTTCTTGTTTACTGTACCGCTGGAATTTCAGGTGGGCATATAAATCCAGCAGTGACATTTGGGCTTTTGTTGGCCCGAAAGGTGTCACTTGTCCGGGCCGTGATGTACATGGTGGCCCAATGTTTAGGGGCCATTTGTGGAGTTGGGCTCGTGAAGTCCTTCCAAAAGGCCCACTTCCAGAAGTACGGCGGTGGGGCAAATGGGCTCGCCGACGGCTACACCGTCGGCGTTGGACTGGCGGCGGAGATCGTAGGGACGTTTGTGTTGGTGTATACAGTCTTCTCTGCTACAGATCCCAAACGAAGCGCAAGAGATTCCCACGTTCCTGTTTTGGCGCCACTCCCAATTGGATTTGCAGTGTTCATAGTTCACCTGGCCACCATTCCAGTCACTGGCACTGGAATCAACCCAGCTAGGAGCTTGGGATCTGCTGTTATTTTCAACCACCAAAACACTTGGAATAATCACTGGATATTTTGGGTTGGACCCTTCATAGGAGCAGCCATTGCAGCTTTCTACCACCAATTCATCCTGCGAGCAGGTGCTGTGAAGGCTCTTGGGTCATTTAGAAGCAACCCAAATGTGTGA | 864 | 52.2 | MAKNAAERGSFSAKDYHDPPPAPLIDAVEITKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDHTGNKNNDACGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLLLARKVSLVRAVMYMVAQCLGAICGVGLVKSFQKAHFQKYGGGANGLADGYTVGVGLAAEIVGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPVTGTGINPARSLGSAVIFNHQNTWNNHWIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPNV | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 19049402 | 19052706 | + | Cp4.1LG01g24430.1 | Cpe01g02241 | 463554 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe01g02241 | 287 | CDD | MIP | 37 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g02241 | 287 | PANTHER | AQUAPORIN PIP2-1-RELATED | 5 | 284 | - | - | |
Cpe01g02241 | 287 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 5 | 284 | IPR034294 | - | |
Cpe01g02241 | 287 | SUPERFAMILY | Aquaporin-like | 29 | 271 | IPR023271 | - | |
Cpe01g02241 | 287 | Gene3D | Glycerol uptake facilitator protein. | 22 | 287 | IPR023271 | - | |
Cpe01g02241 | 287 | TIGRFAM | MIP: MIP family channel proteins | 41 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g02241 | 287 | PRINTS | Major intrinsic protein family signature | 37 | 56 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g02241 | 287 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g02241 | 287 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g02241 | 287 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g02241 | 287 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g02241 | 287 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cpe01g02241 | 287 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - | |
Cpe01g02241 | 287 | Pfam | Major intrinsic protein | 29 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe01g02241 | Cpe09g00420 | CCT | |
Cpe01g02241 | Cpe09g00420 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g02241 | Cpe-Chr1:19049402 | Cpe05g00821 | Cpe-Chr5:5093243 | 1.80E-168 | dispersed | |
Cpe01g01236 | Cpe-Chr1:7408243 | Cpe01g02241 | Cpe-Chr1:19049402 | 2.41E-148 | wgd | |
Cpe01g02241 | Cpe-Chr1:19049402 | Cpe10g00212 | Cpe-Chr10:1212635 | 8.64E-147 | wgd | |
Cpe01g02241 | Cpe-Chr1:19049402 | Cpe13g00804 | Cpe-Chr13:7202436 | 1.04E-32 | wgd | |
Cpe01g02241 | Cpe-Chr1:19049402 | Cpe16g00536 | Cpe-Chr16:6270595 | 7.80E-166 | wgd | |
Cpe01g02241 | Cpe-Chr1:19049402 | Cpe19g00409 | Cpe-Chr19:3617325 | 2.42E-173 | wgd | |
Cpe01g02241 | Cpe-Chr1:19049402 | Cpe08g01099 | Cpe-Chr8:8324588 | 8.51E-152 | wgd | |
Cpe01g02241 | Cpe-Chr1:19049402 | Cpe09g00420 | Cpe-Chr9:2660647 | 5.56E-153 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe01g02241 | K09872 | - | twl:119980357 | 502.286 |