Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02245 ATGGCTTCCAACACCTTGATGAGCTTCGGCATTGCCACCACCGCCTTCCCCTCCGTCCTCTCCTCCTCCAAGTCTAAATTCGCCACCGGTGTCCCGATTTCCGGCGTCTCCGTTAATGCTTCCTCTCGATTTTCCATGTCCGCTGACTGGATGCCTGGCCAGCCCCGCCCGCCGTACCTTGACGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCTCTTCGGCTGGGAGAAGTGCCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATGTTGGTACCTGAGGCGTTGGGATTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCTATTCCAGGAGGTCAAGCTACCTACCTGGGGCAGCCAGTTCCATGGGGAACTTTGCCAACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAACGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCTGGAGGTGCTTTTGACCCATTGGGCTACTCCAAAAACCCTGAAAAGTTGAAGGAATACAAAGTCAAGGAGATCAAAAATGGTCGGTTGGCGTTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCACTCGAGAACTTGGCTACACACTTGGCTGACCCATGGCACAACAACATTGGCGACATCATCATCCCCAGAACGATTTCCCCTTGA 741 53.44 MASNTLMSFGIATTAFPSVLSSSKSKFATGVPISGVSVNASSRFSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGMLVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKNPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRTISP 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19081239 19083162 - Cp4.1LG01g24340.1 Cpe01g02245 463558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02245 246 SUPERFAMILY Chlorophyll a-b binding protein 40 240 - -
Cpe01g02245 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Cpe01g02245 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 26 237 - -
Cpe01g02245 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 26 237 IPR001344 GO:0009765|GO:0016020
Cpe01g02245 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02245 Cpe13g00808 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02245 Cpe-Chr1:19081239 Cpe18g00788 Cpe-Chr18:7444269 7.47E-51 dispersed
Cpe01g02245 Cpe-Chr1:19081239 Cpe13g00808 Cpe-Chr13:7233422 4.16E-176 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02245 K08907 - csv:101211428 493.812