Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02257 ATGGGGAAGAAGGGAGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCAGAATCAAAGGATAAGAAAGATCAGAAAGCTAACAAAACAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGGGGAGCCAGCGCCATTGGAAGTGTCTATTCTACCTATTGAGGAAGTGAAACTAGCTAATGCAGAGAATGAACAGAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCTGCGGAGGTGGCGGTTGCAGCGGCTCAGGCAGCGGCCGAGGTCGTTAGACTCACCACCCGCCCTTGGTACTCCGGGAAATCTAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGCTATATGGCTAGGAGGGCCCTGCGAGCATTAAGAGGGTTGGTGAGGCTGAAGTCATTGATACAAGGCCAATCTGTTAAAAGGCAAGCAACATCCACATTAAGATGCATGCAGACTCTTGCTCGAGTGCAGTCACAGATTCGTGCTAGAAGACTTAGATTGTCGGAGGAGAATCAGGCTCTTCAGAGACAGCTCCAACAAAAACATGAAAGAGAGCTCGAGAGATTAACTGTTTCTGCAAACAATGAATGGGATGATAGTACCAAATCAAAGGAGCAAGTTGAAGCCAGATTAGTTAACAGGCAAGAAGCAGCAACAAGAAGAGAAAGGGCGTTGGCTTATGCTTACTCTCATCAGAAGTTATGGAATAATTCTTCAAAATCTGAAAATCCTACATTCATGGACCCCAACAATCCCCACTGGGGATGGAGTTGGTTAGAGCGATGGATGGCTGCTCGTCCATGGGAGACCAAAAGCACTGTCGATTACCACGATCGTGGCTCTGTCAAGAGCGCGATCAGCCATGCAACGTCAATTGGAGACATTGCAAAATCTTACGCCCGTCGTGATTTCAATCTCGACATCAAGCCTTTTCCAAGGACTCCGACGAGCCATAATACGAGCCGTGCACCAAGTCGCCAATCGCCGGCGACTCCTACGAAGGCGCAATCGTCGCTATCTGCAGGAAGAAAATTGAAGCCAGCAAGTCCAAGAGGATTAGGCTGGGGCGGAGACGACGATTCCAGAAGCGGATTGAGCGTCAAATCGGAGCGGTTCCGGCGACGTAGCATCGCCGGATCATCGGTGAGGGACGACGAAAGCTTCACTAGTTCGCCGTCGGTTCCAAGCTACATGGCGTCCACAGAAGCAGCTAGGGCTAGGTCCCGCTTGTCGAGTCCGATGGGAATAGAGAAGACGACAGCAACTCCGGAGAAAGAAGCGGTGAGTGGCGGCGCAAAGAAGCGGCTCTCATTCACCGCCTCGACGGCGACGGTGAGGAGACACTCTGGTCCACCGAAAATAGACGCTACTCCGATCAAGAATGTTGCAGCGACAGAGAGAGATTTTACCGGCGAGAGCAGATAG 1464 50.48 MGKKGGWFSAVKKAFAPESKDKKDQKANKTKKRWFGKPKKLETVASGEPAPLEVSILPIEEVKLANAENEQSKHAYSVAIATAVAAEVAVAAAQAAAEVVRLTTRPWYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATSTLRCMQTLARVQSQIRARRLRLSEENQALQRQLQQKHERELERLTVSANNEWDDSTKSKEQVEARLVNRQEAATRRERALAYAYSHQKLWNNSSKSENPTFMDPNNPHWGWSWLERWMAARPWETKSTVDYHDRGSVKSAISHATSIGDIAKSYARRDFNLDIKPFPRTPTSHNTSRAPSRQSPATPTKAQSSLSAGRKLKPASPRGLGWGGDDDSRSGLSVKSERFRRRSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGIEKTTATPEKEAVSGGAKKRLSFTASTATVRRHSGPPKIDATPIKNVAATERDFTGESR 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19147453 19151448 + Cp4.1LG01g24290.1 Cpe01g02257 463570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02257 487 Pfam Protein of unknown function (DUF4005) 393 463 IPR025064 -
Cpe01g02257 487 PANTHER IQ-DOMAIN 5-RELATED 1 475 - -
Cpe01g02257 487 SMART iq_5 113 135 IPR000048 GO:0005515
Cpe01g02257 487 Gene3D iswi atpase 111 149 - -
Cpe01g02257 487 MobiDBLite consensus disorder prediction 325 356 - -
Cpe01g02257 487 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Cpe01g02257 487 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 475 - -
Cpe01g02257 487 Coils Coil 170 197 - -
Cpe01g02257 487 MobiDBLite consensus disorder prediction 376 394 - -
Cpe01g02257 487 MobiDBLite consensus disorder prediction 395 411 - -
Cpe01g02257 487 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
Cpe01g02257 487 MobiDBLite consensus disorder prediction 319 487 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe01g02257 Cpe13g00819 CCT
Cpe01g02257 Cpe09g00427 CCT
Cpe01g02257 Cpe09g00427 ECH
Cpe01g02257 Cpe13g00819 ECH
Cpe01g02257 Cpe01g01224 ECH
Cpe01g01224 Cpe01g02257 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01913 Cpe-Chr1:16328012 Cpe01g02257 Cpe-Chr1:19147453 2.14E-38 dispersed
Cpe01g02257 Cpe-Chr1:19147453 Cpe18g00224 Cpe-Chr18:3887819 7.46E-53 dispersed
Cpe08g00055 Cpe-Chr8:364795 Cpe01g02257 Cpe-Chr1:19147453 1.30E-29 dispersed
Cpe13g00482 Cpe-Chr13:4997786 Cpe01g02257 Cpe-Chr1:19147453 8.01E-32 dispersed
Cpe15g00714 Cpe-Chr15:7573458 Cpe01g02257 Cpe-Chr1:19147453 4.24E-17 dispersed
Cpe17g01077 Cpe-Chr17:8183951 Cpe01g02257 Cpe-Chr1:19147453 7.20E-41 dispersed
Cpe19g01052 Cpe-Chr19:7252482 Cpe01g02257 Cpe-Chr1:19147453 7.84E-39 dispersed
Cpe08g00649 Cpe-Chr8:4388801 Cpe01g02257 Cpe-Chr1:19147453 2.65E-48 transposed
Cpe12g00436 Cpe-Chr12:3406540 Cpe01g02257 Cpe-Chr1:19147453 1.11E-44 transposed
Cpe01g01224 Cpe-Chr1:7309625 Cpe01g02257 Cpe-Chr1:19147453 7.89E-95 wgd
Cpe01g02257 Cpe-Chr1:19147453 Cpe10g00203 Cpe-Chr10:1176206 1.23E-130 wgd
Cpe01g02257 Cpe-Chr1:19147453 Cpe13g00819 Cpe-Chr13:7295985 0 wgd
Cpe01g02257 Cpe-Chr1:19147453 Cpe19g00400 Cpe-Chr19:3562230 2.89E-123 wgd
Cpe01g02257 Cpe-Chr1:19147453 Cpe08g01113 Cpe-Chr8:8391889 1.09E-10 wgd
Cpe01g02257 Cpe-Chr1:19147453 Cpe09g00427 Cpe-Chr9:2720724 3.21E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02257 - - cmax:111487231 896.73