Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02266 ATGGAGATTAGCTACGCATCACCTAGCGCGTCTAGTCTTGCTTCCTCTAATTCTGCCCTTTCATCCATGCCTTCCTCCACCCGACCGGTCAAGGTCATTCCCTTGCAGCATCCTAGTACCACGTCGTCCTCGCCGGCCGGTGGTTATTCCGCTGGCGTTCTGGTGAAGAAATGGACGGGGAAGGTTAAGCAGATGACTTGGATTAACTGGATGGAGCTTCTGCTACCGTGCTCGCGTTGGATTAGAACGTATAAATGGCGGGAGTATTTACAGAGCGATCTCTTGTCCGGGATTACCATTGGCATCATGCTCGTTCCGCAGGCAGATTCTGGTTTTCTCCCTTTGTTCGTCTATGCATTTTTTGGTTCTTCTCGTCAGCTTGCTGTTGGTCCAGTAGCATTGGTTTCTCTCCTGGTTTCTAATGTCTTGGGTGGAATTGTCAATTCATCTGAGGAACTATATACTGAACTTGCGATATTATTGGCACTCATGGTTGGAGTATTGGAATGTGTGATGGGGCTCTTGAGGCTTGGGTGGCTTATTCGCTTTATCAGTCACTCTGTAATCTCTGGCTTTACTACAGCTTCTGCCATTGTGATTGGATTATCCCAAGTGAAATACTTTCTGGGGTATGATGTATCAAGAAGTAGCAAAATTGTGCCTCTAATTGAGAGCATAATAGCTGGAGCAGACGGGTTCTTGTGGGCACCGTTCATAATGGGATCAGTTATCCTTGCAGTACTTCAAATCATGAAGCATCTGGGAAAAACAAGGAAGCACTTACGGTTTCTCAGAGTTGCTGGGCCCCTTACAGCAGTTGTTATGGGTACAACATTGGCGAAAGTATTGAATCTGCCATCCATTTCATTGGTTGGAGACATTCCCCAAGGCCTTCCGAAGTTTTCTGTTCCTAAAAGTTTTGAGCATGTGAAGTCGTTGATTCCAACTGCCTTTCTGATCACAGGAGAATCTGTTGGGATTGCGAAAGCATTAGCAGCCAAGAACGGGTACGAGTTAGATTCAAATCAGGAGTTATTTGGTCTTGGAGTATCCAATGTTGTTGGCTCGTTCTTTTCAGCATATCCCACAACAGGTTCTTTCTCAAGATCAGCTGTGAACCACGAAAGTGGAGCAAAAACTAGCTTATCTCAGATTGTTACAGGAGTCGTTATGGGCGGTGCCCTTCTTTTCTTGACTCCATTGTTTGAGCACATACCTCAGTGTGCTTTGGCCGCCATTGTGATTTCCGCTGTAATAACTTTGGTGGATTACGACGAGGCTATTTTTTTGTGGCGTATAAATAAGAAAGATTTTCTTCTTTGGGTGATTACTGCCATTACTACGTTGTTCCTTGGTATTGAGATTGGTGTCTTAATTGGGGTGGGTGTTTCACTGGCCTTTGTCATTCACGAATCTGCAAATCCACATATGGCTGTATTGGGGCGTCTTCCTGGCACAACTGTGTACAGAAATATTCAACAGTATCCTGAGGCATATACTTACAATGGAATTGTGATTGTTCGGATTGATGCACCAATTTATTTTGCAAACACGAGTTACATCAGTGACAGGCTACGTGAATATGAAGTTGAAGTGGACCGATCTACTGGTCGTGGGCCAGATGTTGAAAGAGTCTATTTCGTGGTTATAGAGATGGCACCTGTTACTTACATAGATTCAAGTGCTGTCCAGACTCTAAAAGATTTGTATCAAGAGTACAAACTTCGTGATATTCAGATTGCCATTTCCAATCCGAATCGAGATGTTCTACTTACATTTTCAAGATCTGGCGTTGTTGAGCTTATCGGGAAGGAGTGGTTTTTTGTTAGAGTTCATGATGCAGTTCAAGTTTGTCTTCAGCATGTGGAGAGCCTAAAGGAAACAACCACGAGACCAGTTTCTTCTCCAAATGATGCATCGACCTATATCCAAAGATCTGGCGTTGTTGAGCTTATCGGGAAGGAGTGGTTTTTTGTTAGAGTTCATGATGCAGTTCAAGTTTGTCTTCAGCATGTGGAGAGCCTAAAGGAAACAACCACGAGACCAGTTTCTTCTCCAAATGATGCATCGACCTATATCCAAAGGTTAGTGAAGTCTAGAAATGAGGATTTATCAGTGAGCCAATTAGAGTCAGGCTTCCAAAAGCTTCCAAGTTCTAATGAAATTGACCCTCAATTGGAACCATTACTGTCTCGAAATCCT 2202 43.78 MEISYASPSASSLASSNSALSSMPSSTRPVKVIPLQHPSTTSSSPAGGYSAGVLVKKWTGKVKQMTWINWMELLLPCSRWIRTYKWREYLQSDLLSGITIGIMLVPQADSGFLPLFVYAFFGSSRQLAVGPVALVSLLVSNVLGGIVNSSEELYTELAILLALMVGVLECVMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQVKYFLGYDVSRSSKIVPLIESIIAGADGFLWAPFIMGSVILAVLQIMKHLGKTRKHLRFLRVAGPLTAVVMGTTLAKVLNLPSISLVGDIPQGLPKFSVPKSFEHVKSLIPTAFLITGESVGIAKALAAKNGYELDSNQELFGLGVSNVVGSFFSAYPTTGSFSRSAVNHESGAKTSLSQIVTGVVMGGALLFLTPLFEHIPQCALAAIVISAVITLVDYDEAIFLWRINKKDFLLWVITAITTLFLGIEIGVLIGVGVSLAFVIHESANPHMAVLGRLPGTTVYRNIQQYPEAYTYNGIVIVRIDAPIYFANTSYISDRLREYEVEVDRSTGRGPDVERVYFVVIEMAPVTYIDSSAVQTLKDLYQEYKLRDIQIAISNPNRDVLLTFSRSGVVELIGKEWFFVRVHDAVQVCLQHVESLKETTTRPVSSPNDASTYIQRSGVVELIGKEWFFVRVHDAVQVCLQHVESLKETTTRPVSSPNDASTYIQRLVKSRNEDLSVSQLESGFQKLPSSNEIDPQLEPLLSRNP 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19198200 19208319 - Cp4.1LG01g24030.1 Cpe01g02266 463579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02266 734 ProSiteProfiles STAS domain profile. 494 618 IPR002645 -
Cpe01g02266 734 MobiDBLite consensus disorder prediction 710 734 - -
Cpe01g02266 734 Pfam STAS domain 495 614 IPR002645 -
Cpe01g02266 734 CDD STAS_SulP_like_sulfate_transporter 495 611 - -
Cpe01g02266 734 PANTHER SULFATE TRANSPORTER 4.1-RELATED 638 700 - -
Cpe01g02266 734 PANTHER SULFATE TRANSPORTER 4.1-RELATED 46 628 - -
Cpe01g02266 734 PANTHER SULFATE TRANSPORTER 638 700 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe01g02266 734 Pfam Sulfate permease family 90 444 IPR011547 GO:0016021
Cpe01g02266 734 PANTHER SULFATE TRANSPORTER 46 628 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe01g02266 734 MobiDBLite consensus disorder prediction 1 22 - -
Cpe01g02266 734 Gene3D STAS domain 474 622 IPR036513 -
Cpe01g02266 734 TIGRFAM sulP: sulfate permease 76 614 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cpe01g02266 734 SUPERFAMILY SpoIIaa-like 496 618 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02266 Cpe-Chr1:19198200 Cpe13g00577 Cpe-Chr13:5683783 1.19E-110 dispersed
Cpe01g02266 Cpe-Chr1:19198200 Cpe02g00526 Cpe-Chr2:3113853 1.20E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02266 K18059 - csv:101202870 1144.8