Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02287 ATGCGTCAGGCGACCAAGGACGCTGGAGTCATTTCAGGTCTAAATGTGATGCGTATCATCAACGAACCAACTGCTGCCGCCATTGCTTATGGTCTCGACAAGAAGTCTACCAGCACTGGCGAAAAGAACGTTCTAATTTTTGATTTGGGTGGTGGTACTTTTGATGTTTCGTTGCTCACAATCGAGGAAGGTATCTTCGAAGTGAAGGCAACTGCAGGAGACACCCATCTCGGTGGGGAGGACTTTGATAACAGATTGGTTAACCACTTTGTGCAAGAATTCAAGAGGAAGAACAAGAAAGACATTAGCGGGAACCCGAGAGCTCTTAGGAGGTTGAGAACTGCTTGTGAGAGGGCGAAGAGGACGCTTTCCTCCACAGCCCAAACTACAATTGAGATCGACTCTCTCTACGAGGGAATTGACTTCTATTCCACCATCACCCGTGCTAGATTCGAGGAACTCAACATGGACCTTTTCAGGAAATGTATGGAACCAGTTGAGAAGTGTTTGAGAGACGCCAAGATGGACAAAAGCACCGTCCATGACGTTGTTCTTGTTGGTGGCTCCACTAGGATCCCCAAGGTGCAGCAATTGTTGCAGGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGTATTAATCCTGATGAAGCTGTTGCCTACGGAGCTGCTGTTCAAGCTGCCATCCTGAGCGGAGAGGGTAACGAGAAAGTTCAGGATCTGTTGCTCCTGGATGTCACCCCTCTCTCACTTGGACTCGAAACTGCCGGTGGTGTGATGACTGTTCTTATTCCAAGGAACACCACCATCCCCACCAAGAAAGAACAAGTTTTCTCTACATACTCCGACAACCAACCTGGTGTGTTGATCCAAGTGTACGAAGGTGAGAGGGCAAGAACACGTGACAACAACTTGCTGGGTAAATTTGAGCTCTCCGGTATCCCTCCTGCTCCAAGAGGTGTTCCTCAAATCACTGTCTGCTTCGACATTGACGCCAATGGTATTCTGAATGTTTCCGCCGAGGATAAGACCACTGGTCAGAAGAACAAGATCACAATCACCAACGACAAGGGGCGGTTATCCAAGGAAGAAATTGAGAAGATGGTGCAGGAAGCAGAGAAATACAAGGCCGACGATGAAGAGCACAAGAAGAAGGTTGAAGCTAAGAACTCGTTGGAAAACTATGCTTACAACATGAGAAACACCGTGAGGGATGAGAAGTTCAGCTCTAAGTTAGACCCAGCGGACAAAAAGAAGATCGAAGATGCCATCGAGGGAGCAGTCCAGTGGCTGGACAACAACCAACTTGCAGAGGCCGACGAGTTTGAAGACAAAATGAAGGAGCTTGAGAGCATTTGCAACCCAATTGTTGCTAAGATGTACCAGGGTGCTGGTGGACCTGGCATGGGCGGTGCTGCTATGGATGACGACGACGTCCCCCCTCCATCCGGTGGAAGCGGCGCCGGTCCCAAAATTGAGGAAGTCGACTAA 1488 48.79 MRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKSTSTGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKADDEEHKKKVEAKNSLENYAYNMRNTVRDEKFSSKLDPADKKKIEDAIEGAVQWLDNNQLAEADEFEDKMKELESICNPIVAKMYQGAGGPGMGGAAMDDDDVPPPSGGSGAGPKIEEVD 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19349625 19351798 + Cp4.1LG01g23980.1 Cpe01g02287 463600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02287 495 SUPERFAMILY Actin-like ATPase domain 39 231 IPR043129 -
Cpe01g02287 495 MobiDBLite consensus disorder prediction 462 495 - -
Cpe01g02287 495 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 234 387 IPR029047 -
Cpe01g02287 495 Gene3D - 35 209 - -
Cpe01g02287 495 SUPERFAMILY Actin-like ATPase domain 2 34 IPR043129 -
Cpe01g02287 495 Gene3D - 2 226 - -
Cpe01g02287 495 Gene3D Actin; Chain A, domain 4 78 161 - -
Cpe01g02287 495 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 2 471 - -
Cpe01g02287 495 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 235 392 IPR029047 -
Cpe01g02287 495 Pfam Hsp70 protein 2 461 IPR013126 GO:0005524|GO:0140662
Cpe01g02287 495 PRINTS 70kDa heat shock protein signature 212 232 - -
Cpe01g02287 495 PRINTS 70kDa heat shock protein signature 180 196 - -
Cpe01g02287 495 PRINTS 70kDa heat shock protein signature 239 258 - -
Cpe01g02287 495 PRINTS 70kDa heat shock protein signature 320 336 - -
Cpe01g02287 495 PRINTS 70kDa heat shock protein signature 52 62 - -
Cpe01g02287 495 ProSitePatterns Heat shock hsp70 proteins family signature 2. 46 59 IPR018181 -
Cpe01g02287 495 Gene3D - 388 462 IPR029048 -
Cpe01g02287 495 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 386 468 IPR029048 -
Cpe01g02287 495 ProSitePatterns Heat shock hsp70 proteins family signature 3. 183 197 IPR018181 -
Cpe01g02287 495 Coils Coil 364 384 - -
Cpe01g02287 495 PANTHER HEAT SHOCK PROTEIN 70KDA 2 471 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02287 Cpe-Chr1:19349625 Cpe13g00849 Cpe-Chr13:7464166 0 dispersed
Cpe01g02287 Cpe-Chr1:19349625 Cpe01g02292 Cpe-Chr1:19373503 0 proximal
Cpe01g02287 Cpe-Chr1:19349625 Cpe10g00880 Cpe-Chr10:4955234 0 wgd
Cpe01g02287 Cpe-Chr1:19349625 Cpe13g00846 Cpe-Chr13:7456870 8.94E-93 wgd
Cpe01g02287 Cpe-Chr1:19349625 Cpe19g00364 Cpe-Chr19:3302661 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02287 K03283 - csv:101210925 912.138