Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe01g02288 ATGGACATCCATGTAATACCACAAACGCAAATCGATGACGGCCGTGCTTCAGTCAGCGTTCTTGATTCTGTAGTCTCGTCTCCAAACAACCCCCTCATTCACCTGCGGTTCGGCGGGAGAATGGAATTTGCCGACGAGCATACCGCCGGAGCCACCACCTCCAACTCCGACCGCCATAAGCCCTCCGACACCAGATACGGCGTTGACCTCTCATCCTCTGATAACGATACCGAAGATGCACATCCTGTTTTCTCTAACATGCCTGCTTCACTTGCACCACCAGTTTCTCCGATCCTTCCTCTGCAAAGTAGATGTAATGTAGTAATTCAGGCTGATATGGATGATAAATTGGAGACCATACAAAATATATGTCAGAAAATTGTGGACACCACGAACTTATACTCATTTTCTAAATTGGATGATCATCAAGTATATTCCCTTATGAGGCTGAGGGAAATTTCTCATCGGGTTATTAATGACCGAGATTCAAGGGTGACAAAAAATGATGTGATTAGTGCTATGTGCTTTTACATCAACAGGATGGCAGGTAAGTGCAAGGATATTGTTGACATTTTGAATAGGATATCATATAAAGACCTAGACAGCCAGCAAGTGCAACAGCTATTGAGATTGAAAGAGCTTCTATGTGGGATTGTTGATGGAGCTAAAGATGTGGAGATTGAACCTTCCCATATTGTTGAACAGGGAATTGCAAATGATATGTGGACAACAGAGAGTCTAGAGGTCGAGCCAATTGACTCCAGCAATGATGATGTACTTCTTGGAGATACACAAATTATAATGGTTGAAGTTGAACAGGCAGTGGCTGAGTCTAGGCTCGAGAATGAATATTGTGACCTGTCACATGTTAAGCACACTGTTAGTTGGCCACCACATGGTTGCTTAACCTTAGAGTGGGTTGTAGAGATGATGAAAACACTGGAACAGTCATCAAGAAATTACTCGCCTGCAGAGTTTCAACTTGTCATGCCAGTTTCTGTGGTAGATGAAATACTAGATATGGCTGCAAGCATCCTTCACAAGGAACCAAACTGTGTGGAAATTGACTGCCACGGAGAAGTTTCGAAAGTTGTTATAGTTGGGGACATTCATGGTCATTATCACGACTTACTTCACCTCTTTGAACTTGCTAACTTACCATCTAAGAGCCAATATTATGTTTTTAATGGCAATTATGTGGACAGAGGAGCATGGGGACTGGAGGTGTTTTTGGTCTTATTGGCGTGGAAGATCTTGATGCCTGATAGAGTATGTCTACTCCGTGGAAATCATGAAACCAGAATCTGTACATCATCCTACGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAATGTATATCACAGGTGCTTGGAAACATTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGTATATACAACCCATGGAGGTTTATTTCGTAAGCCATGCAATCCTGATGTGCAGAATTACGAGGAAAGGAAGACACGCGAGCTGGAGATTGGATCCTTAGAAGACTTATCCAAGCTCGAAAGGTTTTTTGTTGATGTTCCAACTAAAGATGAAGATCCAAATATAATTTTGGCAGATGTATTATGGTCGGATCCTTCTAAAGTCGATGGTTTAAGGAAAAACCAAACCAGAGGAGCAGGTTTATTGTGGGGTCCTGATGCGACTGAAGCATTCTTAAAGCTGTCTAATTTAAAGTTGATCATTAGATCACATGAAGGTCCAGATTCAAGGGACGGAAAAATTGATTTTGATGATATGATAATGGGTTATAGCTCAGATCATGACCGAGAATCAGGGAAATTATATACTCTATTTAGCGCTCCGGGTTTCCCACAGTTTGGTCGCAAGAGCTACAATAACGAGGGAGCATATGCTACTTTGAAGCATCCGGATTTTGAGATTCCAACCTTCCACACATTTAAAGCTGTAGATAAACCAAAGATAGACGTTTGCTATTTTGGCTGTGAAGGACATGATGTAGATTTAGACTTGACATTAATGGCTCTGGCTGATGCCGTCTCTTCTAAAAACTCTAGTCCTATTGAGATTCACTCGGGGGTTGATTTTGAGGCATTGGGCATATTAAACCCACCCTCTTGGAGCGTTACAATGACAGATGATGCTACAGGTACCCAGAGTGTTAAGATTCCGAAGGCCCCCGTGGTAGAAGGGTTGCCTTTGCCACCAAGCATCGAGGAACCTCATAAGGCTGCGTATGAGTACTTCCTGGAGCTCATTGCAGGACTGAAGTTTATGCTTCAAACAACGGAAAATAAGGACAAGTTACCCATTCCTCATCGGAAGAGGAAGAAATGCAGTTAG 2352 42.43 MDIHVIPQTQIDDGRASVSVLDSVVSSPNNPLIHLRFGGRMEFADEHTAGATTSNSDRHKPSDTRYGVDLSSSDNDTEDAHPVFSNMPASLAPPVSPILPLQSRCNVVIQADMDDKLETIQNICQKIVDTTNLYSFSKLDDHQVYSLMRLREISHRVINDRDSRVTKNDVISAMCFYINRMAGKCKDIVDILNRISYKDLDSQQVQQLLRLKELLCGIVDGAKDVEIEPSHIVEQGIANDMWTTESLEVEPIDSSNDDVLLGDTQIIMVEVEQAVAESRLENEYCDLSHVKHTVSWPPHGCLTLEWVVEMMKTLEQSSRNYSPAEFQLVMPVSVVDEILDMAASILHKEPNCVEIDCHGEVSKVVIVGDIHGHYHDLLHLFELANLPSKSQYYVFNGNYVDRGAWGLEVFLVLLAWKILMPDRVCLLRGNHETRICTSSYGFEKEVRTKYGEQGENVYHRCLETFKELPLAAIIAGKVYTTHGGLFRKPCNPDVQNYEERKTRELEIGSLEDLSKLERFFVDVPTKDEDPNIILADVLWSDPSKVDGLRKNQTRGAGLLWGPDATEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSSDHDRESGKLYTLFSAPGFPQFGRKSYNNEGAYATLKHPDFEIPTFHTFKAVDKPKIDVCYFGCEGHDVDLDLTLMALADAVSSKNSSPIEIHSGVDFEALGILNPPSWSVTMTDDATGTQSVKIPKAPVVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTTENKDKLPIPHRKRKKCS 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19352274 19361048 - Cp4.1LG01g23860.1 Cpe01g02288 463601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe01g02288 783 Pfam Calcineurin-like phosphoesterase 363 584 IPR004843 GO:0016787
Cpe01g02288 783 SUPERFAMILY Metallo-dependent phosphatases 308 658 IPR029052 -
Cpe01g02288 783 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 116 769 - -
Cpe01g02288 783 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 116 769 - -
Cpe01g02288 783 SMART pp2a_7 330 654 IPR006186 GO:0016787
Cpe01g02288 783 MobiDBLite consensus disorder prediction 49 80 - -
Cpe01g02288 783 Gene3D - 290 683 IPR029052 -
Cpe01g02288 783 PRINTS Serine/threonine phosphatase family signature 363 390 IPR006186 GO:0016787
Cpe01g02288 783 PRINTS Serine/threonine phosphatase family signature 393 420 IPR006186 GO:0016787
Cpe01g02288 783 PRINTS Serine/threonine phosphatase family signature 426 450 IPR006186 GO:0016787
Cpe01g02288 783 PRINTS Serine/threonine phosphatase family signature 463 489 IPR006186 GO:0016787
Cpe01g02288 783 PRINTS Serine/threonine phosphatase family signature 516 543 IPR006186 GO:0016787
Cpe01g02288 783 PRINTS Serine/threonine phosphatase family signature 610 626 IPR006186 GO:0016787
Cpe01g02288 783 MobiDBLite consensus disorder prediction 66 80 - -
Cpe01g02288 783 ProSitePatterns Serine/threonine specific protein phosphatases signature. 427 432 IPR006186 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02288 Cpe-Chr1:19352274 Cpe14g01070 Cpe-Chr14:8907439 3.55E-136 dispersed
Cpe08g01276 Cpe-Chr8:9227523 Cpe01g02288 Cpe-Chr1:19352274 1.90E-36 dispersed
Cpe01g02283 Cpe-Chr1:19325873 Cpe01g02288 Cpe-Chr1:19352274 2.64E-07 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe01g02288 K04460 - csv:101211172 1343.56